Gene Information

Name : Glov_1657 (Glov_1657)
Accession : YP_001951893.1
Strain : Geobacter lovleyi SZ
Genome accession: NC_010814
Putative virulence/resistance : Virulence
Product : Fis family two component sigma-54 specific transcriptional regulator
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG2204
EC number : -
Position : 1766648 - 1768018 bp
Length : 1371 bp
Strand : +
Note : PFAM: response regulator receiver; sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; ATPase associated with various cellular activities AAA_5; SMART: ATPase AAA; KEGG: ppd:Ppro_1655 two component, sigma54 specific, transcri

DNA sequence : 
GTGAGAACCAGAATTCTGGTTGTTGATGATGAATTGAGCATGCGGGAGTTCATCTCGATCCTGCTTGAGCGGGAAGGGTA
TGAGGTGCTGACGGCAGCTGATGCAACCACAGCGCTTACCCGACTGGCAGCCTCAGATATCGATCTGGTGATTTCTGATG
TGCAGATGCCTGGTTTAAGCGGTCTGGAACTGCTTGCACGGATCAAGGAAAATAAGCCTGACACTGCAGTGCTCTTGATT
ACCGCCTTTTCAACGGCCGAGCAGGCGGTTGAGGCGATGAAGCTGGGGGCCTATGATTACCTGGCCAAGCCGTTCAAGGT
GGATGAGATCAAGATCCTGGTCAAAAACGCCTTGGAAAAGCGTGATCTGAAACGTGAAAATCGGCAGCTACGTGAAAAGG
CCGGCGTCTGTGAAGGATATGGTGGTATTGTCGGCACATCGCAGCGGATGAAAGAGGTCTTTAACCTGCTGCGTAAGGTC
GCTGAGTCCCAGACCACGGTACTTGTTTCCGGTGAAAGCGGTACCGGTAAAGAGTTGGCAGCCAAGGCGATCCATGAAGG
CAGTAGTCGTAAAAACAAACCGTTTGTGGCGGTGAATTGTGGTGCCATTCCAGAAAACCTGATTGAAAGTGAACTGTTTG
GCCATGTCAAAGGGGCCTTCACCGGTGCTGTGGGAGAACGGGCCGGGCTGTTTGAACAGGCAAGCGGCGGTACGGTTTTT
CTTGATGAAATAGGTGAACTGCCGCTGGCAATGCAGACCCGCCTGCTACGGGTGATCCAGGAACGTGAACTGCGCCGGGT
TGGCGGATCCGCCACCAAAAAGGTTGATGTGCGTCTGCTGGCAGCCTCAAACCGCGATCTGGCGCTGCAGGTAAAGGAAG
GGACCTTTCGCGAGGATCTCTACTATCGGATCAATGTCGTCCAGGTGGTGATGCCACCCCTGCGTGAACGGGTTGAGGAT
ATTCCGCTATTGGTAGAGCATCTGGTCAGGAAACATTGCGGTACTGGAGGGATTGTCACTTCGGAAGCACTTAAATGCCT
GATGGCTTACCCTTTTCCTGGCAATGTTCGGGAATTGGAGAATATCATTGAACGCAGCCTGGTGCTTGATCGAGAACGGA
TTACCCTGGAGAGTCTGCCCGCTCAGGTCAGGGGGGCGATCAAACGCTTTGACCTGCATGCTGCGGTTGAGATACCTGAT
GAAGGGATTGATCTGGAGCCTGCCCTTGAAAATCTGGAAAAACAGTATCTGGTCAAGGCACTGGAAAAATCAGGTGGAAG
CAAGACCAAGGCAGCCGATCTGCTGGGGATGTCATTCCGTTCCTATCGCTATAAACTGTCCAAATTCGGGCTGGCTGCAG
ATGGGGAGTAA

Protein sequence : 
MRTRILVVDDELSMREFISILLEREGYEVLTAADATTALTRLAASDIDLVISDVQMPGLSGLELLARIKENKPDTAVLLI
TAFSTAEQAVEAMKLGAYDYLAKPFKVDEIKILVKNALEKRDLKRENRQLREKAGVCEGYGGIVGTSQRMKEVFNLLRKV
AESQTTVLVSGESGTGKELAAKAIHEGSSRKNKPFVAVNCGAIPENLIESELFGHVKGAFTGAVGERAGLFEQASGGTVF
LDEIGELPLAMQTRLLRVIQERELRRVGGSATKKVDVRLLAASNRDLALQVKEGTFREDLYYRINVVQVVMPPLRERVED
IPLLVEHLVRKHCGTGGIVTSEALKCLMAYPFPGNVRELENIIERSLVLDRERITLESLPAQVRGAIKRFDLHAAVEIPD
EGIDLEPALENLEKQYLVKALEKSGGSKTKAADLLGMSFRSYRYKLSKFGLAADGE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00300 YP_008207765.1 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains Not tested AbaR25 Protein 2e-75 41
BJAB0868_00304 YP_008211630.1 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains Not tested AbaR26 Protein 2e-75 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Glov_1657 YP_001951893.1 Fis family two component sigma-54 specific transcriptional regulator BAC0467 Protein 1e-75 46
Glov_1657 YP_001951893.1 Fis family two component sigma-54 specific transcriptional regulator BAC0089 Protein 7e-94 46

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Glov_1657 YP_001951893.1 Fis family two component sigma-54 specific transcriptional regulator VFG1214 Protein 2e-82 44
Glov_1657 YP_001951893.1 Fis family two component sigma-54 specific transcriptional regulator VFG0116 Protein 1e-58 44
Glov_1657 YP_001951893.1 Fis family two component sigma-54 specific transcriptional regulator VFG1249 Protein 1e-72 41