Gene Information

Name : Glov_1523 (Glov_1523)
Accession : YP_001951759.1
Strain : Geobacter lovleyi SZ
Genome accession: NC_010814
Putative virulence/resistance : Virulence
Product : ABC transporter
Function : -
COG functional category : G : Carbohydrate transport and metabolism
COG ID : COG1682
EC number : -
Position : 1597711 - 1598526 bp
Length : 816 bp
Strand : +
Note : PFAM: ABC transporter; KEGG: bpd:BURPS668_3252 capsular polysaccharide export inner-membrane protein

DNA sequence : 
ATGACCTTTTCCGAAGGTAAAGCACCCCAATATTCCTCCACGTTGCTACGCTCATTCCAGATCCAGCTGCGGGTGATCGG
CGCCCTGCTGATGCGTGAGGTGCTTACCCGCTATGGCCGCCACAATATCGGTTTTTTGTGGGTATTTGTTGAGCCGATGA
TTTTTACGTTGGGTGTAACTGCGCTTTGGACTTTTGCTAAAATGCATCACAACTCCAGTATTCCGATTGTTGCCTTTGCC
GTTACGGGTTATTCTTCAGTGCTGCTGTGGCGTAATATGCCTAACCGTTGTGTTGGTTCTATAGAGCCTAATCTTGCACT
TATGTATCATCGAAACGTAAAGGTTATTGATGTTTTTGCTGCTCGAGTGTTGCTTGAAGCAGTTGGGGCTTCAACTTCTT
TTATTATCTTGTCAGTTGTTTTTATTTCAATTGGCTGGATGCAGTATCCTCAGGATATTTTTAAGGTTCTGACTGGATGG
TGCATGTTAGCATGGTTCGGTGCTTCAATTGCGGTTTTGATGGGAAGTCTCAATGAACGGACAGAAGTTGTTGAAAAACT
CTGGCATCCTGCTACTTATCTGCTATTTCCGTTGTCAGGTGCCGCTTTTATGGTTGATTGGCTGCCTCCCACGGCACAAA
AAATTATCCTGTTTTTACCAATGGTGCATGGTGTAGAAATTCTGCGTGAAGGTTATTTTGGTTCTCTTGTCCGGTCCCAC
TACAGTATTTCTTATATGGCTTCCGTTTGCTTGATCCTAAATGCACTTGCGCTTGCCCAGGAAAGGTATGTGAGTAAGAG
GATAATCCCAGAATGA

Protein sequence : 
MTFSEGKAPQYSSTLLRSFQIQLRVIGALLMREVLTRYGRHNIGFLWVFVEPMIFTLGVTALWTFAKMHHNSSIPIVAFA
VTGYSSVLLWRNMPNRCVGSIEPNLALMYHRNVKVIDVFAARVLLEAVGASTSFIILSVVFISIGWMQYPQDIFKVLTGW
CMLAWFGASIAVLMGSLNERTEVVEKLWHPATYLLFPLSGAAFMVDWLPPTAQKIILFLPMVHGVEILREGYFGSLVRSH
YSISYMASVCLILNALALAQERYVSKRIIPE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ctrC NP_273137.1 capsule polysaccharide export inner-membrane protein Not tested IHT-A Protein 5e-46 45

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Glov_1523 YP_001951759.1 ABC transporter VFG2564 Protein 4e-78 64
Glov_1523 YP_001951759.1 ABC transporter VFG0257 Protein 2e-46 45
Glov_1523 YP_001951759.1 ABC transporter VFG0697 Protein 4e-47 43
Glov_1523 YP_001951759.1 ABC transporter VFG0685 Protein 4e-47 43