|
Name : Glov_1280 (Glov_1280) Accession : YP_001951522.1 Strain : Geobacter lovleyi SZ Genome accession: NC_010814 Putative virulence/resistance : Virulence Product : general secretory pathway protein E Function : - COG functional category : N : Cell motility COG ID : COG2804 EC number : - Position : 1327895 - 1329460 bp Length : 1566 bp Strand : - Note : KEGG: gme:Gmet_3365 type II secretion system protein E; TIGRFAM: general secretory pathway protein E; PFAM: type II secretion system protein E; general secretory system protein E; SMART: AAA ATPase DNA sequence : ATGAGCCCCGAGCACGCCCTGGACAACCTTAAGACTGCGGCTGAGCGCCTGAACCTGCCTTTTCTGGAGCGGATTGACGA CCAGCAGGCCAACAGCTCGTTACTGGCCAGACTCCCGCTTGCCTTTGCCCGCAGCAAGCTGCTGTTGCCGCTGCAGGAAA AAGAGGACCGCCTGCTGCTTGCCGTGGCCAACCCTACGGACCTGCTGGCCCAGGATGAGGTGGCCAAGCTGTATAACCTG CCGCTCTCCGTGCTGGTGGTACCGCCGGATGAGCTGCTGGCAGCAATCAACCGGCTCTACAGCCGCACAGCCGGATCGGC CCGTGAGGTGGTGGAGAATCTGGCCGATGAAGACCTCTCGGTCATCGCCACCGAGCTGGCCCATCCCAAGGATCTGCTTG ATTTAAGCGATGAGGCACCGGTCATCCGTCTCCTGAATGCGATCCTCTTCCAGGCGGTCAAGGAACGAGCCAGCGACATC CATATCGAACCGTTTGAACGGACCCTAGATGTCCGTTTTCGGGTTGACGGCATTCTGCATCAGGTCCTGGAACCGCCCAA GGTGCTGCAGGAGGCGCTGGTGTCGCGGGTCAAGATCATGGCCGCGCTGAATATCGCGGAAAAGCGCCTGCCCCAGGATG GCCGTTTCAAGGTGCTGGTGGCAGGCCATGAGGTGGATATCCGGGTCTCGATCATCCCGACCTTTTTCGGCGAGCGGACC GTACTGCGTCTGCTTGACCGCCACAAGGGAATCCTGTCACTGACCGACATCGGTTTTTCCGAGCGGGATCGCGACACCAT GCAGCGTCTGATCAGCCGCTCCAGCGGCATCATCCTGGTGACCGGCCCCACCGGCAGCGGCAAGACCACCACCCTCTATG CCGCCGTCTCACGCCTGAACCGCCAGGAAAAGAACCTGATCACCATTGAAGACCCGATTGAATACCAGTTGTCCGGTGTC GGCCAGATACAGGTCAACCCGAAGATCGACCTGACCTTTGCCAACGGACTGCGTTCAATCCTGCGCCAGGACCCGGACAT CATCATGGTGGGCGAGATCCGTGATGCCGAAACCGCCGAGATTGCCATGCAGGCCTCGCTGACCGGCCACCTGGTACTCT CGACCCTGCATACCAACGATGCTGCCACGGCCGTTACCAGATTGATGGACATGGGGATTGAGCCGTTTATGGTGGCTTCA TCCCTGGCGGGCATCCTGGCACAACGCCTGGTACGGACCATCTGCCCCCACTGCCGCGAGTCCTACCGGCCGGAACAGCC GGTTGAGGGACTGCCGGAGCTGCTCTACCGCGGCCGGGGCTGTGACCACTGCTTCGGGCAGGGGACTCTGGGCAGAACCG GGATCTACGAACTGCTGACCATTGATTCCGAGCTGTGCAGCATGATCACCAGACAGGCCCCGGCCGGTGAAATCAAGGAA TATGCCATTTCATGCGGTATGCGAACGCTGCGGGAAGATGGTTTTGCCAAGGTAGCCGCAGGGATCACCACCCTGGAAGA GGTCCTGAGGGTAACCCAGGAAGAGTATGTCGACCTTCCAGTATAA Protein sequence : MSPEHALDNLKTAAERLNLPFLERIDDQQANSSLLARLPLAFARSKLLLPLQEKEDRLLLAVANPTDLLAQDEVAKLYNL PLSVLVVPPDELLAAINRLYSRTAGSAREVVENLADEDLSVIATELAHPKDLLDLSDEAPVIRLLNAILFQAVKERASDI HIEPFERTLDVRFRVDGILHQVLEPPKVLQEALVSRVKIMAALNIAEKRLPQDGRFKVLVAGHEVDIRVSIIPTFFGERT VLRLLDRHKGILSLTDIGFSERDRDTMQRLISRSSGIILVTGPTGSGKTTTLYAAVSRLNRQEKNLITIEDPIEYQLSGV GQIQVNPKIDLTFANGLRSILRQDPDIIMVGEIRDAETAEIAMQASLTGHLVLSTLHTNDAATAVTRLMDMGIEPFMVAS SLAGILAQRLVRTICPHCRESYRPEQPVEGLPELLYRGRGCDHCFGQGTLGRTGIYELLTIDSELCSMITRQAPAGEIKE YAISCGMRTLREDGFAKVAAGITTLEEVLRVTQEEYVDLPV |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| gspE | YP_854406.1 | type II secretion protein GspE | Not tested | PAI I APEC-O1 | Protein | 8e-106 | 48 |
| gspE | CAE85233.1 | GspE, hypothetical type II secretion protein | Not tested | PAI V 536 | Protein | 6e-106 | 48 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Glov_1280 | YP_001951522.1 | general secretory pathway protein E | VFG0182 | Protein | 6e-115 | 52 |
| Glov_1280 | YP_001951522.1 | general secretory pathway protein E | VFG2048 | Protein | 7e-107 | 48 |
| Glov_1280 | YP_001951522.1 | general secretory pathway protein E | VFG1876 | Protein | 2e-101 | 47 |
| Glov_1280 | YP_001951522.1 | general secretory pathway protein E | VFG2426 | Protein | 1e-74 | 44 |
| Glov_1280 | YP_001951522.1 | general secretory pathway protein E | VFG1880 | Protein | 1e-86 | 44 |
| Glov_1280 | YP_001951522.1 | general secretory pathway protein E | VFG0112 | Protein | 3e-87 | 41 |
