Gene Information

Name : tctD (BMULJ_03420)
Accession : YP_001947829.1
Strain :
Genome accession: NC_010805
Putative virulence/resistance : Virulence
Product : OmpR family two-component system response regulator
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 240869 - 241534 bp
Length : 666 bp
Strand : -
Note : COG0745: Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain, Xylella fastidiosa 9a5c; KEGG, K07774; TctD protein

DNA sequence : 
ATGCGCATTCTCGTCGTGGAGGACGATGCGGAGATCGGCGCGGCGATCCGCAGCCGCCTCGCGCGGCTCGGCCATGCCGT
CGATCTCGAAACCGACGGCTCGACCGCGAACAGCCTGCTGCGCGTCGAGCGCTTCGACCTCGTCGTGCTCGACGCCAACC
TGCCCGGCCTCGACGGCTTCGCGGTGCTGCGCAACCTGCGCGCCGCGGGCAGCACGACGCCGGTGCTGCTCGTCACCGCG
CGTTCGGCGATCGACGATCGCGTCAGCGGTCTCGGCCTCGGCGCCGACGACTATCTCGTGAAGCCGTTCGACTACCGCGA
GCTCGACGCGCGCGTGCAGGCGCTGCTACGCCGCAACAGCGGCCATGCGAGCGACGTGCTGACGCTCGGCGGCCTCGTGA
TCGACCGCAGCAGCCGCCTCGCGGAACTCGACGGCAAGCCGCTGTCGCTGTCGCGCCAGGAGTTCGCGCTGCTCGAGATT
CTCGCGAGCCGCCCGCAGCGGATCTTCTCGAAGGACGAACTACTGAATCAGCTGTTCAGTTTCGGCAACGAGCCGAGCGC
GAACGCGGTCGAGCAGTATGTAACGCGCGTGCGCAAAAAGCTGCAAGGCAGCTCGGTCGAGATCCGCACCGCGCGCGGGA
TGGGGTATCAGATTGCCGCGCACTGA

Protein sequence : 
MRILVVEDDAEIGAAIRSRLARLGHAVDLETDGSTANSLLRVERFDLVVLDANLPGLDGFAVLRNLRAAGSTTPVLLVTA
RSAIDDRVSGLGLGADDYLVKPFDYRELDARVQALLRRNSGHASDVLTLGGLVIDRSSRLAELDGKPLSLSRQEFALLEI
LASRPQRIFSKDELLNQLFSFGNEPSANAVEQYVTRVRKKLQGSSVEIRTARGMGYQIAAH

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
armR AAN62112.1 putative response-regulator ArmR Not tested PAGI-2(C) Protein 2e-33 43
copR NP_460069.2 transcriptional regulatory protein YedW Not tested SPI-5 Protein 7e-33 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
tctD YP_001947829.1 OmpR family two-component system response regulator BAC0083 Protein 8e-34 42
tctD YP_001947829.1 OmpR family two-component system response regulator BAC0638 Protein 3e-29 42
tctD YP_001947829.1 OmpR family two-component system response regulator BAC0197 Protein 1e-33 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
tctD YP_001947829.1 OmpR family two-component system response regulator VFG0596 Protein 3e-33 41
tctD YP_001947829.1 OmpR family two-component system response regulator VFG1390 Protein 2e-35 41
tctD YP_001947829.1 OmpR family two-component system response regulator VFG1389 Protein 2e-29 41