|
Name : prpR (BMULJ_05239) Accession : YP_001949613.1 Strain : Genome accession: NC_010805 Putative virulence/resistance : Unknown Product : propionate catabolism operon regulatory protein Function : - COG functional category : K : Transcription COG ID : COG3829 EC number : - Position : 2309187 - 2311169 bp Length : 1983 bp Strand : + Note : COG3829: Transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains, Ralstonia solanacearum; KEGG, K02688 DNA sequence : ATGGACCTCTCTTCGATCAAGCCGGCCGGCGCCGCCGACCGCACGGTGCGCCCGCGCATCTGGGCGATGGGCATCAGCCG GTTGCGCGACCTGTTTCGCGAAATCGCCGGCGAATTCGACGAACGCGCGGACGTGCGCATCGTCACGCGCGCGTACGAGG ATGCGCTCGGCGCCATCGCCGAGGCCGGCACCGCGCGGCCCGACGTGATCGTCGCGGCCGGCTCGAACGGCGGCTTCCTG AAGACGCGCGCGCAGGTGCCCGTCGTCGTCGTGTCGCCGACCGGCTTCGACGTGATGCAGGCGCTCGCGCGCGCACGGCG CGATGCGACGCGCATCGCGCTCGTCAGCGCCGGCGACACGCCGCCCGAAGTGCGCCGCTTCGTCGCCGCGTACGGTCTGG ACGTGCAGTTTGCGTCATATCAGACCGCACAGGAAGCCGAAGCGTGCGTGCACGATCTGCGCGATCGCGGCATCGAAACG ATCGTCGGGCCCGGCCTCGTCACCGATCTCGCGGCAAGCGCCGGGATGGGCGCCGTGTTCCTGTATTCGCACGCATCGGT GCGCAGGGCCGTCGAAACGGCGCTCGAAGTCGCGTACGCGACGCATGCCGAAGCGTTTCGCCGCCAGCGGCTCGACACGC TGCTCCAGCATCTGCGCGACGGCGTCGTCGCGCTCGACGCGCAGGGCCGCGTCGAGGCGATCAACGAGCGGCTCGCGTCG GCGCTCGGCGTCGAGCCGTCGGCCGCGGTCGGCCGCGCGCTCGTCGATCTGCGGCCCGAGCTGCGCACGCTGCGCGGCGA GGACGGCGATGCGCTCGCGACCGTGCGCGGCGTGCGCTACGTCGTGCATCGCGGGCCGCTCGTCGATCGCGGCGTCACGT CCGGCAGCGTGCTGACGTTCCAGGAATCGCGCGCGGTCGAGCGGCTCGATCGCGCGCTGCGCTCGCAGCCGAACACGCAG CAGTTCGCCGCGCGCTATTCGCTCGACGACGTCGTCGGCGCATCCGCGCCGATGACGCGCGTGCGAGAGCTCGTGCGCCG CTACGCGAAATCCGACGCGACCGTGCTCGTGCTCGGCGAAAGCGGCACCGGCAAGGAGATGATCGCGCAGAGCCTGCATG CGCTCTCCGCGCGACGCAGCTATCCGTTCGTCGCGGTCAATTGCGGCGCATTTCCGGAAGCGCTGCTCGAAAGCGAGCTG TTCGGCTACGAGGAAGGCGCGTTTACGGGCGCGCGCCGCGGCGGCAAGACCGGGCTGTTCGAGGCCGCGCATCGCGGCAC GCTGTTTCTCGACGAGATCGGCGAAATGCCGCCGTCGCTGCAAAGCCGGCTGCTGCGCGTACTGCAGGAGCGCGAGGTGA TCCGCCTCGGCTCGACCGAACCGATCCGCATCGACGTGCGCGTGATCGCCGCGACGCACCGGCCGCTGCTCGCGGCCGTC GAGGCCGGCACGTTCCGCGCCGATCTCTATTACCGGCTCAACATCCTGAATGTCGGCCTGCCGCCGCTGCGCGAACGCGC GGCCGACATTCCCGCGCTCGCCGCGACGCTGCTCGTGCAGGCCGCGCGGCGCGAGCCGCGGCTCGCGGAGCGGCTGCGCG ACGCCGACGATGCGGCGCGCGTGCTCGGCGCGGTGCAGCCGACGCTCACGCGCTACCGGTGGCCCGGCAACGTGCGCGAA TTGCAGAACGTGATCGAGCGGATCGCGGTGGAGCTGGCCGACGCGGCCGACGAAGGCGATGCGGCCGCGCCCTGCGCGGC GCTCGCGCCCGACGCGCTGCAGACGATCGCGCCCGAGCTGTTCGCCGCGCCGCCCGACGGCGGCGACGCCGAGGACGCGC AGACGCTGCAGGCGCGCCGCCGCCGCGCGGAAGCGGACGAGATCCGTGCGGTGCTCGACGCCTGCGGCGGCGACCGCGAT CGTGCGTGCGCGATGCTCGGCATCAGCAAGACGACGCTTTGGCGGAAGTTGTCCGCGAAATAA Protein sequence : MDLSSIKPAGAADRTVRPRIWAMGISRLRDLFREIAGEFDERADVRIVTRAYEDALGAIAEAGTARPDVIVAAGSNGGFL KTRAQVPVVVVSPTGFDVMQALARARRDATRIALVSAGDTPPEVRRFVAAYGLDVQFASYQTAQEAEACVHDLRDRGIET IVGPGLVTDLAASAGMGAVFLYSHASVRRAVETALEVAYATHAEAFRRQRLDTLLQHLRDGVVALDAQGRVEAINERLAS ALGVEPSAAVGRALVDLRPELRTLRGEDGDALATVRGVRYVVHRGPLVDRGVTSGSVLTFQESRAVERLDRALRSQPNTQ QFAARYSLDDVVGASAPMTRVRELVRRYAKSDATVLVLGESGTGKEMIAQSLHALSARRSYPFVAVNCGAFPEALLESEL FGYEEGAFTGARRGGKTGLFEAAHRGTLFLDEIGEMPPSLQSRLLRVLQEREVIRLGSTEPIRIDVRVIAATHRPLLAAV EAGTFRADLYYRLNILNVGLPPLRERAADIPALAATLLVQAARREPRLAERLRDADDAARVLGAVQPTLTRYRWPGNVRE LQNVIERIAVELADAADEGDAAAPCAALAPDALQTIAPELFAAPPDGGDAEDAQTLQARRRRAEADEIRAVLDACGGDRD RACAMLGISKTTLWRKLSAK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | AAK01495.1 | propionate catabolism operon regulator prpR | Not tested | PAGI-1 | Protein | 2e-100 | 41 |
