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Name : ldcC (BMULJ_04816) Accession : YP_001949199.1 Strain : Genome accession: NC_010805 Putative virulence/resistance : Unknown Product : lysine decarboxylase Function : - COG functional category : E : Amino acid transport and metabolism COG ID : COG1982 EC number : 4.1.1.18 Position : 1822791 - 1825133 bp Length : 2343 bp Strand : + Note : COG1982: Arginine/lysine/ornithine decarboxylases, Salmonella typhimurium LT2; KEGG, K01582 DNA sequence : ATGACCGCTTCCTTGACCCAACCGGCGTTCCGCCGCCTCGGCATGAAGGCGCTGCTGGTGCAGCACGACATCGACGCACG CACGGCCACCGCACGCGCCGCGACGGCGCTCGCCGACGAGCTGCGTGCGCGGCTCGTCGACCTCGTGATCGCGACGTCCG CGGACGATGCGCGCGCGGTGGTCGATGCCGATCCGGCAATCCAGTGCCTGCTGCTCAACTGGGAACTCGGCGACGATCCG CAGCACACGCCCGCGCAGGCCGTGCTCGACGCGATGCGCGCACGCAATGCGACGGTGCCCGTGTTCCTGCTCGCGAGCCG CGCGAGTGCGTCCGCGATTCCCGTCGACGCGATGCGCAAGGCCGACGACTTCATCTGGCTGCTCGAAGACACCACCGCGT TCATCGGCGGCCGGATCGTCGCCGCGATCGAACGCTATCGCGAAACCGTACTGCCGCCGATGTTCCGCGCGCTCGCGCAG TTCTCGCGCGTGTACGAATACTCATGGCACACGCCCGGCCACACGGGCGGCACTGCGTTCCTGAAATCGCCGGTCGGCCG CGCCTATTTCGAGTTCTTCGGCGAATCGCTGTTCCGCTCCGACCTGTCGATCTCGGTCGGCGAACTCGGCTCGCTGCTCG ATCACTCCGGTCCGATCGGCGACAGCGAACGCTATGCGGCACGCGTGTTCGGCGCGCACCGCACGTATCACGTGACGAAC GGCTCGTCGATGTCGAACCGCGTGATCCTGATGGCGAGCGTCACGCGCAACCAGGTCGCGCTGTGCGACCGCAACTGCCA CAAGTCGGCCGAGCATGCGATCACGATGTCGGGCGCGATCCCGACCTACCTGATTCCGTCGCGCAACCACTACGGCATCA TCGGGCCGATCATGCCCGAGCGGCTGACCGCCGCCGCGGTGCGGCTCGCGATCGACGCGAACGCGCTCGTGCGCGGCCGC GACGGTATCGACGCGACGCCCGTGCATGCGCTGATCACGAACTCGACGTACGACGGCCTCTGCTACAACGTCGCGCGCGT CGAAGCACTGCTCGGCCAGAGCGTCGATCGGCTGCATTTCGACGAAGCATGGTACGGCTATGCGCGCTTCAACCCGATCT ATCGCGATCGCCACGCGATGCACGGCGACCCGGCACAGCACGATGCCAGCAAGCCGACCGTGTTCGCGACGCAGTCGACG CACAAGCTGCTCGCCGCGCTGTCGCAGGCATCCTTCATCCACGTCCGCGACGGCCGCAACCCGATCGAGCACGCGCGCTT CAACGAGGCGTACATGATGCATGCGTCGACGTCGCCGAACTACGCGATCATCGCGTCGAACGACGTGAGCGCCGCGATGA TGGACGGCCCCGGCGGCGAAGCGCTGACGACCGACGCGATCCGCGAGGCCGTCGCGTTCCGCCAGATGCTCGGACGCCTG CACGCCGAATGCGCGGAGAACGACGACTGGTTCTTCAACGGCTGGCAGCCCGACACCGTCGTGGACCGCAAGACGGGCCG GCGCATGCGCTTCCATGAAGCGGACGAGACGCTGCTCGCGACCGATCCGTCGTGCTGGGTGCTGCATCCGGGCGACGCGT GGCACGGCTTCGGCGATATCGAGGACGACTACTGCATGCTCGACCCGATCAAGGTGTCGATCGTCACGCCGGGCATCGCG CCGCACGGGGGGCTGATGCCGGTCGGCATTCCGGCCTCGGTCGTCACCGCGTATCTGGATCGGCACGGAATCGTGGTCGA GAAGACCACCGACTTCACGATCCTGTTCCTGTTCTCGCTCGGCGTGACGAAGGGCAAGTGGGGCACGCTCGTCAACACGT TGCTCGACTTCAAGCGCGACTACGACGCGAACGTGTCGCTCGAACAGGCGCTGCCCGACCTCGTCGCACGCTATCCGGAC CGCTACCGCAAGCTCGGCCTGCGCGACCTGTGCGACCTGATGTTCGCTGCGATGAGCGATCTGAAGACGACCGAGATGAT GTCGCGCGGCTTCTCGACGCTGCCGAAGCCGGATTTCAGCCCGGCCGAGGCGTTCGAGCATCTGGTGCATAACGACATCG AGATGCTCGAGCTGTCGGAGATGGCAGGCCGCACCGTCGCGACCGGCGTGGTCCCGTATCCGCCCGGCATTCCGCTGCTG ATGCCGGGCGAGAACGCGGGGCCCGCCGACGGCCCGCTGCTCGGCTACCTAAAGGCGCTCGAACAGTACGACCTGCGCTT CCCCGGCTTCACGCACGACACGCACGGCGTCGATGTCGAGGACGGCGTGTACCGGATCGCGTGCATCAAGCTGCCGAAAC GCGACGGCGGCAATACGCGCTGA Protein sequence : MTASLTQPAFRRLGMKALLVQHDIDARTATARAATALADELRARLVDLVIATSADDARAVVDADPAIQCLLLNWELGDDP QHTPAQAVLDAMRARNATVPVFLLASRASASAIPVDAMRKADDFIWLLEDTTAFIGGRIVAAIERYRETVLPPMFRALAQ FSRVYEYSWHTPGHTGGTAFLKSPVGRAYFEFFGESLFRSDLSISVGELGSLLDHSGPIGDSERYAARVFGAHRTYHVTN GSSMSNRVILMASVTRNQVALCDRNCHKSAEHAITMSGAIPTYLIPSRNHYGIIGPIMPERLTAAAVRLAIDANALVRGR DGIDATPVHALITNSTYDGLCYNVARVEALLGQSVDRLHFDEAWYGYARFNPIYRDRHAMHGDPAQHDASKPTVFATQST HKLLAALSQASFIHVRDGRNPIEHARFNEAYMMHASTSPNYAIIASNDVSAAMMDGPGGEALTTDAIREAVAFRQMLGRL HAECAENDDWFFNGWQPDTVVDRKTGRRMRFHEADETLLATDPSCWVLHPGDAWHGFGDIEDDYCMLDPIKVSIVTPGIA PHGGLMPVGIPASVVTAYLDRHGIVVEKTTDFTILFLFSLGVTKGKWGTLVNTLLDFKRDYDANVSLEQALPDLVARYPD RYRKLGLRDLCDLMFAAMSDLKTTEMMSRGFSTLPKPDFSPAEAFEHLVHNDIEMLELSEMAGRTVATGVVPYPPGIPLL MPGENAGPADGPLLGYLKALEQYDLRFPGFTHDTHGVDVEDGVYRIACIKLPKRDGGNTR |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| cadA | NP_756988.1 | lysine decarboxylase, inducible | Not tested | PAI II CFT073 | Protein | 4e-122 | 41 |
