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Name : gspE (BMULJ_00008) Accession : YP_001944529.1 Strain : Genome accession: NC_010804 Putative virulence/resistance : Virulence Product : general secretion pathway protein E Function : - COG functional category : N : Cell motility COG ID : COG2804 EC number : - Position : 10870 - 12366 bp Length : 1497 bp Strand : + Note : COG2804: Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB, Ralstonia solanacearum; KEGG, K02454 DNA sequence : GTGAGCGACCTGCTGTCCTCCGCCCACGACGGCGCACCCGGCGAACGGCAGCCGCCCTCGCCGCTCGCCGCGCGGCTGCT GCCGTACGGCTTCGCGAAGAACGGCCAGGTGCTGATCGCGCACCAGCTCGACGACACGCTCGAGGTGTGGATCAGCGATC GCACGAACGACGCCGCGCTGGCCGAGATCGCACGCAATTTCGGCTCGATCGTCGTGCAGCGTGTGCCGGCCGACGAGCTC GCGCAGGCGATCAACCACGCGTATGCGCGGCAGGACGGCAGCGCTGCGCAGATCGTCGGCGAGGTCGAAGGCGAAGTCGA TCTGTCGCGGCTGATGCAGGACATCCCGGAAGTCGAGGATCTGCTCGAATCGGAGGACGACGCGCCGATCATCCGGATGA TCAACGCGCTGCTGACGCAGGCCGCGCGCGAACAGGCGTCGGACATCCATATCGAACCGTTCGAGAATGCATCGGTCGTG CGCTTTCGCGTCGACGGCACGCTGCGCGACGTCGTGCGGCCGAAGAAGGCGCTGCACGGCGCGCTGATCTCGCGCATCAA GATCATGGCGCAGCTCGACATCGCGGAAAAGCGTCTGCCGCAGGACGGCCGCATCACGCTGCGCGTCGGCGGCCGACCGG TCGACGTGCGCGTGTCGACGCTGCCGACCGGCCACGGCGAACGCGCGGTGCTGCGTCTGCTCGAGAAGGACGCGCAGCGG CTGAACCTCGAAGCGCTCGGGATGGGCCGCGACACGCTCGTGCAGTTCGACAAGCTGATCTCGCGTCCGCACGGCATCGT GCTCGTCACCGGGCCTACGGGCTCCGGGAAGACGACGACGCTGTACGCGTCGATGTCGCGGCTCGAAACCGCGACGACCA ATATCATGACCGTCGAGGATCCGATCGAATACGACCTGTCGGGCATCGGCCAGACGCAGGTCAACGAGCGGATCGGGATG ACCTTCGCGCGCGCGCTGCGCTCGATCCTGCGTCAGGACCCGGACGTGATCATGATCGGCGAAATCCGCGACCTCGAAAC CGCACAGATCGCGGTGCAGGCCTCGCTCACCGGCCACCTCGTGCTCGCGACGCTGCACACGAACGATGCGGCGTCGGCCG TCACGCGTCTGACCGACATGGGCGTCGAGCCGTATCTGCTCGCGTCGTCGCTGCTCGGCGTGCTCGCGCAGCGGCTCGTG CGCCAGCTTTGCCCCGTCTGCAAGGAAGAGCGGCACGAGGACGGCCGCAGCGTGTGGCATCCGGTGGGCTGCGACAAGTG CGGGCATTCGGGCTACACGGGCCGGCGCGGCGTGTACGAGCTGCTGATCGTCGACGATGCGATCCGCACGCTGATTCACC GCAACGCGGCCGACGCGGAGATTCTCGCGGCCGGCCGCGCGCAGGGCATGCGCACGCTGCGCGACGACGCGGAGCGCTGG CTCGCGGCCGGTGCGACGTCGCTCGAGGAAGTGCTGCGCGTGACGGGAGGCGCATAG Protein sequence : MSDLLSSAHDGAPGERQPPSPLAARLLPYGFAKNGQVLIAHQLDDTLEVWISDRTNDAALAEIARNFGSIVVQRVPADEL AQAINHAYARQDGSAAQIVGEVEGEVDLSRLMQDIPEVEDLLESEDDAPIIRMINALLTQAAREQASDIHIEPFENASVV RFRVDGTLRDVVRPKKALHGALISRIKIMAQLDIAEKRLPQDGRITLRVGGRPVDVRVSTLPTGHGERAVLRLLEKDAQR LNLEALGMGRDTLVQFDKLISRPHGIVLVTGPTGSGKTTTLYASMSRLETATTNIMTVEDPIEYDLSGIGQTQVNERIGM TFARALRSILRQDPDVIMIGEIRDLETAQIAVQASLTGHLVLATLHTNDAASAVTRLTDMGVEPYLLASSLLGVLAQRLV RQLCPVCKEERHEDGRSVWHPVGCDKCGHSGYTGRRGVYELLIVDDAIRTLIHRNAADAEILAAGRAQGMRTLRDDAERW LAAGATSLEEVLRVTGGA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| gspE | YP_854406.1 | type II secretion protein GspE | Not tested | PAI I APEC-O1 | Protein | 9e-117 | 53 |
| gspE | CAE85233.1 | GspE, hypothetical type II secretion protein | Not tested | PAI V 536 | Protein | 7e-117 | 53 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| gspE | YP_001944529.1 | general secretion pathway protein E | VFG0182 | Protein | 3e-125 | 55 |
| gspE | YP_001944529.1 | general secretion pathway protein E | VFG1876 | Protein | 1e-118 | 52 |
| gspE | YP_001944529.1 | general secretion pathway protein E | VFG2048 | Protein | 6e-117 | 52 |
| gspE | YP_001944529.1 | general secretion pathway protein E | VFG0233 | Protein | 1e-86 | 49 |
| gspE | YP_001944529.1 | general secretion pathway protein E | VFG2426 | Protein | 1e-76 | 48 |
| gspE | YP_001944529.1 | general secretion pathway protein E | VFG0112 | Protein | 6e-81 | 43 |
