Gene Information

Name : BMULJ_00006 (BMULJ_00006)
Accession : YP_001944527.1
Strain :
Genome accession: NC_010804
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : M : Cell wall/membrane/envelope biogenesis
COG ID : COG0741
EC number : -
Position : 7737 - 8159 bp
Length : 423 bp
Strand : -
Note : COG0741: Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains), Ralstonia solanacearum

DNA sequence :
GTGTGGATCGCCGCCGGCGCGTGGTTCGCCAGCGCGAACGCGCACGCCGATTGTTTCGACGAGGCCGCCCGCTATCAGAA
GGTCAATCCGCTGATCCTGCGCGCGATCGCCTGGCAGGAGTCGCGCAACCGCCCGAGCGCACTGAACAAGAACACGAACG
GGTCCGTCGATTACGGGCTCATGCAGATCAATTCGGTCCATCTGTCGACGCTGTCGCGCTACGGCATCGATCGCGACACG
CTGATGGAGCCGTGCAAGAACGTCTATATCGCCGCGTGGCATCTGCGGCAGAAAATGAACCGCTACGGCAACACGTGGCA
GGCCGTCGGCGCCTATCATTCGGAAACGCCGGCACTGCGCGACAAGTACGCGCGGCAGATCGCGGCGATCCTCGCGCAGT
GGAAACTGCTGCCGCCGCAATAG

Protein sequence :
MWIAAGAWFASANAHADCFDEAARYQKVNPLILRAIAWQESRNRPSALNKNTNGSVDYGLMQINSVHLSTLSRYGIDRDT
LMEPCKNVYIAAWHLRQKMNRYGNTWQAVGAYHSETPALRDKYARQIAAILAQWKLLPPQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
XC_3001 YP_244069.1 Hpa2 protein Virulence Hrp PAI Protein 3e-36 67
hpa2 NP_636615.1 Hpa2 protein Virulence Hrp PAI Protein 3e-36 67
hpa2 AAF61278.1 Hpa2 precursor Virulence Hrp PAI Protein 3e-35 66
hpa2 NP_640772.1 Hpa2 protein Virulence Hrp PAI Protein 5e-36 65
hpaH YP_362172.1 transglycosylase HpaH Virulence Hrp PAI Protein 1e-35 65
hpaH AAL78295.1 HpaH precursor Virulence Hrp PAI Protein 8e-36 65
unnamed AAC38373.1 rOrf3 Not tested LEE Protein 4e-16 42
ECO103_3629 YP_003223486.1 hypothetical protein Not tested LEE Protein 4e-17 42
unnamed AAK26704.1 unknown Not tested LEE Protein 3e-17 42
ECO26_5260 YP_003232142.1 hypothetical protein Not tested LEE Protein 4e-17 42
unnamed AAL57531.1 unknown Not tested LEE Protein 3e-17 42
st13 CAC81851.1 ST13 protein Not tested LEE II Protein 3e-17 42
unnamed CAI43885.1 hypothetical protein Not tested LEE Protein 3e-17 42
unnamed ACU09469.1 putative lytic transglycosylase Not tested LEE Protein 1e-16 41
ECO111_3763 YP_003236099.1 hypothetical protein Not tested LEE Protein 2e-16 41
Z5131 NP_290279.1 hypothetical protein Not tested LEE Protein 1e-16 41
unnamed AAC31524.1 L0045 Not tested LEE Protein 1e-16 41
ECs4579 NP_312606.1 hypothetical protein Not tested LEE Protein 1e-16 41
iagB NP_457271.1 cell invasion protein Virulence SPI-1 Protein 8e-15 41
iagB NP_806480.1 cell invasion protein Virulence SPI-1 Protein 8e-15 41
iagB YP_217796.1 cell invasion protein Virulence SPI-1 Protein 8e-15 41
iagB NP_461798.1 invasion protein precursor Virulence SPI-1 Protein 8e-15 41
unnamed AAL06358.1 unknown Not tested LEE Protein 2e-17 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
BMULJ_00006 YP_001944527.1 hypothetical protein VFG1789 Protein 1e-17 44
BMULJ_00006 YP_001944527.1 hypothetical protein VFG0994 Protein 2e-10 44
BMULJ_00006 YP_001944527.1 hypothetical protein VFG0719 Protein 2e-16 42
BMULJ_00006 YP_001944527.1 hypothetical protein VFG0823 Protein 4e-17 41
BMULJ_00006 YP_001944527.1 hypothetical protein VFG0539 Protein 2e-15 41