|
Name : Clim_0940 (Clim_0940) Accession : YP_001942996.1 Strain : Chlorobium limicola DSM 245 Genome accession: NC_010803 Putative virulence/resistance : Unknown Product : integrase catalytic subunit Function : - COG functional category : L : Replication, recombination and repair COG ID : COG2801 EC number : - Position : 1028247 - 1029167 bp Length : 921 bp Strand : + Note : PFAM: Integrase catalytic region; KEGG: cph:Cpha266_1954 integrase, catalytic region DNA sequence : ATGAAAGCGCGTAAAAACTGGATCAGCGACAAAGAACAGTTGTCGGTATCTACCCAATGTGAACTTGCCGGAGTAACCCG GTCAGGGTACTACGGGCAAAGTAAAAGCCTCATGCCAAATACTGAAGATCTGGAACTGATGAAGCTTATCGACGAGGAGT ACACCCGACATCCGTTTTATGGAAGCCGACGGATGAAGCAGGTCCTGCTCACCCAAGGGCGCAAGGTCAACCGGAAACGA GTACAGCGCCTGATGCGTAACCTGGGGCTTGCGGGTATGGCTCCAGGGCCCAATACCAGCAAACCGCATCCGCAGCACAA GATCTATCCATACCTGTTGCGAGGTCTTTCCATTACCAGACCGAACCATGTCTGGTCTACCGATGTGACCTATTGCCGGT TACCCGGCGGCTTCATGTATCTGACGGCCGTCATCGACTGGTATTCCCGCAAGGTGCTGGCATGGAGGCTTTCGAATTCC CTGGATAGCAGCTACTGTGTTGATTGTCTGGAAGAAGCTATCCGCAAGTACGGAACGCCGGAAATCTTCAACACCGATCA GGGCGTTCAGTACACCAGTGATGCGTTCACCAGCGTGCTCAAGAGCCATGAGATCCGCATCAGCATGGATGGCCGTGGCC GGGCCCTGGACAATGTTTTCGTCGAGCGGTTATGGCGGAATGTCAAGCAGGAAGACCTGTACCTGAAAGGCTATGAAACA GCGGTAGAAATGATGCGGGGATTCGCCGAATATTTCCGTTTTTACAATATCGAGCGGCCTCATCAGTCGCTGGGGTACAA AACCCCGGACGAGGTGTATGAAAGCGCCATAGGAGGCGGAGCACGCATTGTCGACAAGTTCTCTAAGAGTGTCTCCGAAG GGTCGTCGGAGGCTACAGGGCCGCAACAGGAAGCGGCATAA Protein sequence : MKARKNWISDKEQLSVSTQCELAGVTRSGYYGQSKSLMPNTEDLELMKLIDEEYTRHPFYGSRRMKQVLLTQGRKVNRKR VQRLMRNLGLAGMAPGPNTSKPHPQHKIYPYLLRGLSITRPNHVWSTDVTYCRLPGGFMYLTAVIDWYSRKVLAWRLSNS LDSSYCVDCLEEAIRKYGTPEIFNTDQGVQYTSDAFTSVLKSHEIRISMDGRGRALDNVFVERLWRNVKQEDLYLKGYET AVEMMRGFAEYFRFYNIERPHQSLGYKTPDEVYESAIGGGARIVDKFSKSVSEGSSEATGPQQEAA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| ABK1_0264 | YP_005512836.1 | insB | Not tested | AbaR4d | Protein | 6e-59 | 51 |
| unnamed | ACF06170.1 | putative transposase | Not tested | Tn5036-like | Protein | 1e-63 | 50 |
