Gene Information

Name : Clim_2139 (Clim_2139)
Accession : YP_001944142.1
Strain : Chlorobium limicola DSM 245
Genome accession: NC_010803
Putative virulence/resistance : Unknown
Product : nicotinate-nucleotide pyrophosphorylase
Function : -
COG functional category : H : Coenzyme transport and metabolism
COG ID : COG0157
EC number : 2.4.2.19
Position : 2357442 - 2358317 bp
Length : 876 bp
Strand : -
Note : KEGG: cph:Cpha266_2293 nicotinate-nucleotide pyrophosphorylase [carboxylating]; TIGRFAM: nicotinate-nucleotide pyrophosphorylase; PFAM: Quinolinate phosphoribosyl transferase

DNA sequence :
ATGCCGCATACGCTATCTGATTTTTATGCAGGATGCCGTTCACGGGCAGTCATTCTGGCTCTCGAAGAAGATCGTTATAC
AGGAGACATAACCACTCTTGCAACCATTCGGCAAGGCCAGCAGGGGTGCGCCGTCATCAAAGCCAAAGCGGAAGGCGTAC
TTGCGGGAGCTTCAGTTGCCGAAGAGGTGTTCAAGGCCTGTGACCCTGGCCTGACAATAGTATTTTTACGTAACGATGGC
GATCACATCAGGATGGGCGATACCGTTCTTGAGGTATCTGGCGGTATCGCATCGCTGCTTATGGCTGAGCGTACTGTTCT
GAATTTCATGCAACGCATGTCAGGCATCGCTACGCGAACGAACACGTATGTGAATAAAATCAGCCATACCGGAACCGCGA
TACTCGATACGCGGAAAACCGTCCCGGGGTTACGTTATTTCGACAAGGAGGCTGTGCGTATCGGAGGAGGGAAAAACCAC
AGGTTTGGCCTTTTCGATATGATACTCATCAAGGATAATCATATCGATGCTTGCGGCGGTGTAGGCAATGCTGTCAGGGA
AGCGGTTGCGTACCGTAAAAATAACGGACTCGATGTGCAGATAGAAACCGAGGTGCGTTCATTGGAAGAACTTGCCGAAG
CGCTGCCCTGTGGTCCGGATATCGTGCTTCTCGACAATCTTTCGGTCGATATGCTGCAGCAGGCTGTTGCTTTCGCACGT
GCAGAAGCGCCATCGGTAAAGCTTGAGGCATCCGGAAACGTAGGCCTGCACAATGTCGCGGCAATTGCCGAAACAGGAGT
TGATTACATATCGATCGGCGAGCTCACGCACAGTGTGACTGCCCTCGACCTTTCCATGACGATTGCGTTAGTCTGA

Protein sequence :
MPHTLSDFYAGCRSRAVILALEEDRYTGDITTLATIRQGQQGCAVIKAKAEGVLAGASVAEEVFKACDPGLTIVFLRNDG
DHIRMGDTVLEVSGGIASLLMAERTVLNFMQRMSGIATRTNTYVNKISHTGTAILDTRKTVPGLRYFDKEAVRIGGGKNH
RFGLFDMILIKDNHIDACGGVGNAVREAVAYRKNNGLDVQIETEVRSLEELAEALPCGPDIVLLDNLSVDMLQQAVAFAR
AEAPSVKLEASGNVGLHNVAAIAETGVDYISIGELTHSVTALDLSMTIALV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
nadC YP_281534.1 nicotinate-nucleotide pyrophosphorylase Not tested Not named Protein 9e-37 42