Gene Information

Name : Clim_2021 (Clim_2021)
Accession : YP_001944032.1
Strain : Chlorobium limicola DSM 245
Genome accession: NC_010803
Putative virulence/resistance : Resistance
Product : arsenical-resistance protein
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG0798
EC number : -
Position : 2239583 - 2240638 bp
Length : 1056 bp
Strand : -
Note : TIGRFAM: arsenical-resistance protein; PFAM: Bile acid:sodium symporter; KEGG: cte:CT1724 arsenite efflux transporter

DNA sequence :
ATGGGCATGTCAACGAAACAACTCTCCTTTCTCGACCGGTACCTTACGCTCTGGATATTCCTCGCCATGGCAGTCGGCGT
ATTCTCGGGCTATCTTGTTCCCGGTACGGCGGCGTTCTGGAATACCTTTCAGTCGGGTACCACCAATATCCCCATCGCCA
TAGGGCTTATCGTCATGATGTATCCGCCTCTGGCCAAGGTGAAGTACGAGGAGCTTGGCGATGTGTTCCGCAACACCAGA
GTGCTCGGGCTTTCCCTTGTGCAGAACTGGGTGATCGGGCCGGTGCTCATGTTCGTGCTTGCAGTGCTCTTTCTTTCCGA
TATGCCGCATTACATGGCCGGACTCATCCTGATCGGCCTGGCACGCTGCATTGCCATGGTGATCGTCTGGAACGAGCTGG
CAAAAGGCGATACGGAGTACGCGGCAGGTCTCGTCGCCTTCAACTCGGTCTTTCAGGTGCTGTTCTTCTCCGTTTACGCG
TGGGTATTCCTCACGGTGCTGCCCGGCTGGCTCGGCCTCTCGTCGTTCAGGGTCGATATCACCATCGCCGAAATCGCTTC
GTCGGTTTTCATCTACCTCGGCATTCCCTTCATTGCGGGTTTTCTTACCCGGTTCGTCATGCTCCGCATCAAAGGCAGGG
AGTGGTACGAAACCGTTTTCGTGCCGCGCATCAGTCCCCTGACGCTCGTTGCGCTGCTCTTTACCATCGTGGTGATGTTC
TCGCTGAAAGGCGAGTATATCGTGAAAATTCCCATGGATGTGGTGCGCATCGCCATACCGCTGCTTTGCTACTTCATCAT
CATGTTCTTCGTTTCGTTCTGGATGGGACGCAAGGTCGGTGCGGATTACTCCAAAACAGCCACGCTCTCATTCACGGCGG
CGAGCAACAACTTCGAGCTTGCCATAGCCGTGGCCGTGGCGGTGTTCGGTATCGATTCCGGCGAAGCGTTCGCCGCCGTG
ATCGGGCCGCTCGTGGAGGTTCCCGCCCTGATCGGTCTGGTAAATGTATCGCTCTGGTTCAGGGAGAAATGGTTCGGGGG
ATCATCTGCAGCTTAA

Protein sequence :
MGMSTKQLSFLDRYLTLWIFLAMAVGVFSGYLVPGTAAFWNTFQSGTTNIPIAIGLIVMMYPPLAKVKYEELGDVFRNTR
VLGLSLVQNWVIGPVLMFVLAVLFLSDMPHYMAGLILIGLARCIAMVIVWNELAKGDTEYAAGLVAFNSVFQVLFFSVYA
WVFLTVLPGWLGLSSFRVDITIAEIASSVFIYLGIPFIAGFLTRFVMLRIKGREWYETVFVPRISPLTLVALLFTIVVMF
SLKGEYIVKIPMDVVRIAIPLLCYFIIMFFVSFWMGRKVGADYSKTATLSFTAASNNFELAIAVAVAVFGIDSGEAFAAV
IGPLVEVPALIGLVNVSLWFREKWFGGSSAA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
arsB ADZ05767.1 arsenic resistance protein Not tested AbaR11 Protein 2e-81 62
arsB AFC76433.1 ArsB Not tested AbaR5 Protein 4e-101 61
arsB CAJ77016.1 transmembrane protein of arsenate pump Not tested AbaR1 Protein 3e-101 61

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Clim_2021 YP_001944032.1 arsenical-resistance protein BAC0573 Protein 1e-119 70
Clim_2021 YP_001944032.1 arsenical-resistance protein BAC0004 Protein 4e-82 52