Gene Information

Name : Clim_1902 (Clim_1902)
Accession : YP_001943913.1
Strain : Chlorobium limicola DSM 245
Genome accession: NC_010803
Putative virulence/resistance : Unknown
Product : integrase catalytic subunit
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG2801
EC number : -
Position : 2106324 - 2107247 bp
Length : 924 bp
Strand : -
Note : PFAM: Integrase catalytic region; KEGG: cph:Cpha266_1954 integrase, catalytic region

DNA sequence :
ATGAAAGCGCGTAAAAACTGGATCAGCGACAAAGAACAGTTGTCGGTATCTACCCAATGTGAACTTGCCGGAGTAACCCG
GTCAGGGTACTACGGGCAAAGTAAAAGCCTCATGCCAAATACTGAAGATCTGGAACTGATGAAGCTTATCGACGAGGAGT
ACACCCGACATCCGTTTTATGGAAGCCGACGGATGAAGCAGGTACTGCTCACCCAAGGGCGCAAGGTCAACCGGAAACGA
GTACAGCGCCTGATGCGTAACCTGGGGCTTGCGGGTATGGCTCCAGGGCCCAATACCAGCAAACCGCATCCGCAGCACAA
GATCTATCCATACCTGTTGCGAGGTCTTTCCATTACCAGACCGAACCATGTCTGGTCTACCGATGTGACCTATTGCCGGT
TACCCGGCGGCTTCATGTATCTGACGGCCGTCATCGACTGGTATTCCCGCAAGGTGCTGGCATGGAGGCTTTCGAATTCC
CTGGATAGCAGCTTCTGTGTTGATTGTCTGGAAGAAGCTATCCGCAAGTACGGAACGCCGGAAATCTTCAACACCGATCA
GGGCGTTCAGTACACCAGTGATGCGTTCACCAGCGTGCTCAAGAGCCATGAGATCCGCATCAGCATGGATGGCCGTGGCC
GGGCCCTGGACAATGTTTTCGTCGAGCGGTTATGGCGGAATGTCAAGCAGGAAGACCTGTACCTGAAAGGCTATGAAACA
GCGGTAGAAATGATGCGGGGATTCGCCGAATATTTCCGTTTTTACAATATCGAGCGGCCTCATCAGTCGCTGGGGTACAA
AACCCCGGACGAGGTGTATGAAAGCGCCATAGGAGGCGGAGCACGCATCGTCGACAAGTTCTCTCAAAAGAGTGTCTCCG
AAGGGTCGTCGGAGGCTACAGGGCCGCAACAGGAAGCGGCATAA

Protein sequence :
MKARKNWISDKEQLSVSTQCELAGVTRSGYYGQSKSLMPNTEDLELMKLIDEEYTRHPFYGSRRMKQVLLTQGRKVNRKR
VQRLMRNLGLAGMAPGPNTSKPHPQHKIYPYLLRGLSITRPNHVWSTDVTYCRLPGGFMYLTAVIDWYSRKVLAWRLSNS
LDSSFCVDCLEEAIRKYGTPEIFNTDQGVQYTSDAFTSVLKSHEIRISMDGRGRALDNVFVERLWRNVKQEDLYLKGYET
AVEMMRGFAEYFRFYNIERPHQSLGYKTPDEVYESAIGGGARIVDKFSQKSVSEGSSEATGPQQEAA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ABK1_0264 YP_005512836.1 insB Not tested AbaR4d Protein 3e-59 52
unnamed ACF06170.1 putative transposase Not tested Tn5036-like Protein 6e-64 50