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Name : Clim_1823 (Clim_1823) Accession : YP_001943841.1 Strain : Chlorobium limicola DSM 245 Genome accession: NC_010803 Putative virulence/resistance : Unknown Product : seryl-tRNA synthetase Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG0172 EC number : 6.1.1.11 Position : 1997774 - 1999057 bp Length : 1284 bp Strand : + Note : catalyzes a two-step reaction, first charging a serine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA DNA sequence : ATGCTTGATATTACCTATATCCGCCAGAATCAGGACGACGTCACTGCCATGCTCAGGAACCGGTTGCTTGAAAGCGAAAT ACCAAGGGTTGCCGAGCTGCTCGGGCTTGACAGGCAGCGCCGGGAACTGGTACAGCAGGCCGACGATATGAAAGCCCTGC GCAACAGGGTCTCCCGCGACATAGCCGACATGAAAAAATCCGGGAGCGGCCCTGCCGATGAGCTTATCGGAAAAATGAAA TCGGTCGCCGAAAATATTGCTGCAAGCGACACGTCCCTCAAAAACCTTGAATCTGCAATCGAGGAGATCCTGCTGACGCT TCCCAACAGACTGCACAACTCCGTACCCGTCGGCAAAAGCGCGGAAGAGAACGTTATCCTTAAAGAACAGGGGGGATTTG ACTATCCGCTTGACTTTCCTCTGAAAAATCATACCGAGCTCGGAAAATCACTCGGCATCCTCGACTTCGAACGGGGAGCC AAAGTCGGTGGCGCAGGATTTCCTGTCTATACCGGTAAAGGAGCGAGACTGGAACGTTCGCTCATCAATTTCATGCTCGA CACGCACACCTCCGGTCACGGCTATACCGAAATCTTTCCGCCGTTCCTTGTCAACCGCGAATCGCTCAGGGGTACAGGGC AGTGGCCTAAATTTGCCGACCAGGTCTATACCATCGAGGAAGACGGACTCTACGCCATTCCGACCGCCGAAGTACCCGTA ACCAACCTGCATCGCGGAGAAATGCTCGATGCGGCAGACCTTCCTATAGCCTATGCCGCATACTCGGCATGTTTCAGAAG AGAGGCCGGCAGCTATGGAAAGGACACCAGAGGATTTCTGAGGGTTCACCAGTTCAACAAGGTTGAAATGGTCCGCTTTA CCCGACCTGAAGTTTCATACGAGGCTCTCGAAGAGATCCGGCAGCACGCCGAGGCTATTCTTCTGGCGCTGAAAATACCA TACAGGGTGCTGCTGCTCTGCAGCGGCGATATCAGTGCAAACGCGACCAAATGTTACGACATAGAGGTCTGGTCGCCTGC CGAAGACAAATATCTCGAAGCATCGAGCTGTTCCAACTTCGAGGACTACCAGGCCCGTCGCATGAACATCCGCTACCGAC CCGACGGCAAATCCCGGCCGGAATTCGTGCACACCCTCAACGGCTCCGGGCTTGCCACCTCACGCCTCATGGTCTCGCTG CTCGAACACAACCAGACCCCTGAAGGCAAGGTTATCGTTCCCGAAGTACTCAGACCCTACACCGGATTCGACATCATCGG CTGA Protein sequence : MLDITYIRQNQDDVTAMLRNRLLESEIPRVAELLGLDRQRRELVQQADDMKALRNRVSRDIADMKKSGSGPADELIGKMK SVAENIAASDTSLKNLESAIEEILLTLPNRLHNSVPVGKSAEENVILKEQGGFDYPLDFPLKNHTELGKSLGILDFERGA KVGGAGFPVYTGKGARLERSLINFMLDTHTSGHGYTEIFPPFLVNRESLRGTGQWPKFADQVYTIEEDGLYAIPTAEVPV TNLHRGEMLDAADLPIAYAAYSACFRREAGSYGKDTRGFLRVHQFNKVEMVRFTRPEVSYEALEEIRQHAEAILLALKIP YRVLLLCSGDISANATKCYDIEVWSPAEDKYLEASSCSNFEDYQARRMNIRYRPDGKSRPEFVHTLNGSGLATSRLMVSL LEHNQTPEGKVIVPEVLRPYTGFDIIG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| serS | YP_003446791.1 | seryl-tRNA synthetase | Not tested | The aminoglycoside resistance gene cluster | Protein | 3e-90 | 48 |
