Gene Information

Name : Clim_1743 (Clim_1743)
Accession : YP_001943763.1
Strain : Chlorobium limicola DSM 245
Genome accession: NC_010803
Putative virulence/resistance : Unknown
Product : potassium-transporting ATPase subunit A
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG2060
EC number : 3.6.3.12
Position : 1916086 - 1917756 bp
Length : 1671 bp
Strand : +
Note : KEGG: pla:Plav_1014 potassium-transporting ATPase, A subunit; TIGRFAM: potassium-transporting ATPase, A subunit; PFAM: K transporting ATPase A subunit

DNA sequence :
ATGGTACCGTTACTGTTGCTGACCGTCATCGTTCCCGCCCTGCTGTCCTGGCCGCTCGGAAAAGTTATGGCTCATCTGAT
CGAGCCCGGCGGAACATCCCTCTACGGACGCCGGACATCGGAACTTTTCTGCAGGACAGGAGGAGACGCGCTCACTGGTG
AACAGGACTGGAAGCAGTACCTCGTCTCCATGCTCGTGTTCAACATGATGATGTTCGCTTTCGTGACGACGGTACTTGCC
CTTCAGCAGTGGCTGCCGCTGAACCCTGACGGTAAAGGCCCTCTGGAAGCAAGCCTGATATTCAACACCGCGGCGTCGTT
CGTCACAAACACCAACCTCCAGCACTATTCCGGAGAAGCCGCAATGAGCTATTTCTCCCAGCTTGCCGGACTGATGTGGC
TGCAGTTCGTCTCCGCTGCCACAGGAATCGCATGCCTTGCCGCCCTTGCGCGCGCGTTGGGAGGCAGGAAGAGCGTCGGC
AATTTTTACCTCGATCTTCTCAGGATCACTTTTTTCGTGCTGCTGCCGCTCGCCCTGCTTGTTGCGCTCGTCCTGGTTGC
CGGGGGGGTGCCGATGACCTTCGAAGGCGCTGCTGTAGCCCGTACCCTCGAAGGGGCAACGCAGACCATAGCCCGCGGGC
CTGTTGCAGCCATGGTGGCCATCAAACAGCTTGGCACGAACGGTGGCGGTTATTTCGGCCCCAACTCCACCCACCCGTTC
GAAAACCCATCCTTCTACACCAACATCGTGGAATGTATGAGCATTGTCCTGATTCCCATGGCGGCTGTCTGGATGTTCGG
GCGCATCACTGGTCGCATGCGCGACGCATCGGTCATCTTCTCGGTCATGATGATTCTGCTGCTCGTCAAGGCTGCGGCCG
CATTCTGGCTTGAAAACGCTCCCGCTGCGGCACTTTGGGGGCTTCCCGTCGAGGCCGTCCCGAATCTCGAGGGGAAGGAA
CTGCGTTTCGGGGCAGGAGCCGGCGCCCTCTGGGCTGCGCTCACGACAGCAACAAGCAACGGATCGGTCAACTGCATGCA
CGACAGCCTCAACCCGCTTACCGGCCTCGTACCGCTGGCCGGCATGTGGATCAATGTCGTGTTCGGCGGTGTCGGCGTCG
GCCTCATCAACCTGTTCATCTTCATCGTCATCGGCGTCTTCATCTGCGGCATGATGGTGGGCCGCACCCCTGAATATTTC
GGAAGGAAAGTCGAAACCGGGGAAATGCGGCTTGCCCTGCTTGCCCTTCTGGTGCATCCCCTTCTGATCCTCGGAGGAAC
GGCTCTCTTCGCGGCCACTCCGGCCGGGGCGGCAACCGTGCTGAACAGCGGAGCCCACGGGTTCACGGAAATCCTCTACG
AGTTCACTTCAGCCGCGGCCAACAACGGATCGGGTTTCGAGGGACTCGGCGACAACACCGTTGCCTGGAACATCGCCACC
GGAGTGGTGATGCTGCTGGCCCGTTATATCCCCATCATTCTGCCCCTTGCGATCGCCGGATCACTGGCGTCGAAAAAACC
GGTACCGGAAACCTCCGGGACCCTTCGAACCGACACCCTGCTGTTCGGGCTCATCATTCTGGGCAGCGTGATCTTCATCG
GAGCGCTGCTGTTCCTTCCGGTAGCCGTGCTCGGACCCGTTGCAGACCATCTCTCGGCGGCAAGCCATTAA

Protein sequence :
MVPLLLLTVIVPALLSWPLGKVMAHLIEPGGTSLYGRRTSELFCRTGGDALTGEQDWKQYLVSMLVFNMMMFAFVTTVLA
LQQWLPLNPDGKGPLEASLIFNTAASFVTNTNLQHYSGEAAMSYFSQLAGLMWLQFVSAATGIACLAALARALGGRKSVG
NFYLDLLRITFFVLLPLALLVALVLVAGGVPMTFEGAAVARTLEGATQTIARGPVAAMVAIKQLGTNGGGYFGPNSTHPF
ENPSFYTNIVECMSIVLIPMAAVWMFGRITGRMRDASVIFSVMMILLLVKAAAAFWLENAPAAALWGLPVEAVPNLEGKE
LRFGAGAGALWAALTTATSNGSVNCMHDSLNPLTGLVPLAGMWINVVFGGVGVGLINLFIFIVIGVFICGMMVGRTPEYF
GRKVETGEMRLALLALLVHPLLILGGTALFAATPAGAATVLNSGAHGFTEILYEFTSAAANNGSGFEGLGDNTVAWNIAT
GVVMLLARYIPIILPLAIAGSLASKKPVPETSGTLRTDTLLFGLIILGSVIFIGALLFLPVAVLGPVADHLSAASH

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed BAB43902.1 potassium-transporting ATPase(A chain) Not tested Type-II SCCmec Protein 7e-66 47
SAR0070 YP_039538.1 potassium-transporting ATPase subunit A Not tested Type-II SCCmec Protein 1e-65 47
truncated-kdpA NP_370596.1 potassium-transporting ATPase subunit A Not tested Type-II SCCmec Protein 1e-65 47
kdpA NP_373308.2 potassium-transporting ATPase subunit A Not tested Type-II SCCmec Protein 1e-65 47
kdpA YP_190030.1 potassium-transporting ATPase subunit A Not tested Type-II SCCmec Protein 1e-65 47
kdpA YP_251948.1 potassium-transporting ATPase subunit A Not tested SCCmec Protein 6e-66 46