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Name : Clim_1669 (Clim_1669) Accession : YP_001943690.1 Strain : Chlorobium limicola DSM 245 Genome accession: NC_010803 Putative virulence/resistance : Unknown Product : thiamine biosynthesis protein ThiC Function : - COG functional category : H : Coenzyme transport and metabolism COG ID : COG0422 EC number : - Position : 1835038 - 1836720 bp Length : 1683 bp Strand : + Note : required for the synthesis of the hydromethylpyrimidine moiety of thiamine DNA sequence : ATGAACACCTTTTCGGACAATATCTTCTGCCCTGAGCACCGCATGTACGGCAACGCTTCGAAAAAAACCCACACAAAGGG ATGCATCCACCCCATAGAAGTCGGCATGAGAACCCTCAGCCTCACGAAAACCTACACCTGCAGGGGAATCGAATTTTCAT CGATCCCGCTCTACGACACAAGCGGACCCTATTCCGACCCATCCGTAATAATAAATCCTGAAAAAGGACTGAATCCGCTT CGCGACAAGTGGAAGTTCAACAGCGAAAACACGGAACCTGTTTCTGAACAAGGCAATGAAACTGCAGCTGCCAGAGTGCC GCTTCGGGCAAAAAAAGGGTGCTCCGTCACGCAGCTCGCCTTTGCGCGCAAGGGAATCATCACTCCCGAAATGGAGTATG TGGCTATTCGCGAAAACCAGCAGCTCGAAGAATGGATCGCATCATTCCCGATCGGCGGAAAAACCGCAGAACCCTTCACC GCAGAATTCGTACGGCAGGAAGTTGCGGCCGGCAGGGCCATCATTCCTGCCAACATTAACCACCCCGAACTTGAGCCGAT GATTATCGGAAGAAATTTCAGGGTAAAGATCAATGCGAACATCGGCAACTCCGCCATGGGGTCCTCTATCGAAGAAGAGG TCGAAAAAGCCGTATGGGCATGCCGCTGGGGCGCCGATACCGTGATGGACCTCAGTACAGGAACCAACATCCACCAGACC AGGGAGTGGATACTGCGTAACTCACCCGTTCCTATCGGCACGGTTCCAATGTACCAGGCGCTTGAAAAAGCCGGAGGCGT TGCAGAAAACCTCACCTGGGAACTCTACCGCGATACGCTCGTCGAACAGGCGGAACAGGGAGTCGATTACTTCACCATCC ATGCCGGTATTCTGCAGGAGCATTTGCCGGCCGCGGGCCGGCGCATGACCGGTATCGTGTCGCGAGGAGGTGCAATCATG GCCAAATGGTGCAAAACCAATAACCGGGAAAATTTCCTGTACACCCATTTCGACGAGATCTGCGAAATCTTGAGAAGCTA CGACATCGCCATTTCGCTCGGCGACGCTTTGCGACCCGGCTGTATTGCAGACGCAAACGACGAGGCTCAGTTCGGTGAAC TGAAAGTGCTCGGCGAACTGACCCTCCTGGCATGGGAGCACGACGTGCAGGTAATGATCGAGGGACCGGGCCATGTACCT CTCAATCTCGTGGAAGAGAACATGCGGAAACAGCTCGAACTTTGCCACGGAGCCCCGTTCTACACGCTCGGTCCGCTTAT TACCGATATTGCTGCCGGTTACGACCACATCAATTCTGCTATCGGCGGCACACTGATTGCCGCATACGGCTGTTCCATGC TCTGCTATGTCACCCCGAAAGAGCATCTCGGCCTGCCAGACAAGAACGACGTGAGAGAAGGCGTTGTGGTACACAAAGTA GCCGCACACGCTGCCGATATTGCGAAAGGAAACCCGACCGCATGGCTGCAGGACGAACTGATGAGTCGCGCCCGATACGC ATTTGCCTGGGAGGATCAGTTCAATCTTTCGCTCGATCCCGTAAAAGCCAGGGTGCTGTACGCCGAAAGCAGGGCCGCAA GCGGACAGACCGACGGGAATCCGGACTTCTGTACCATGTGCGGCCCGGATTTCTGCTCCATGAAACGCTCGCAGGAAAAG TGA Protein sequence : MNTFSDNIFCPEHRMYGNASKKTHTKGCIHPIEVGMRTLSLTKTYTCRGIEFSSIPLYDTSGPYSDPSVIINPEKGLNPL RDKWKFNSENTEPVSEQGNETAAARVPLRAKKGCSVTQLAFARKGIITPEMEYVAIRENQQLEEWIASFPIGGKTAEPFT AEFVRQEVAAGRAIIPANINHPELEPMIIGRNFRVKINANIGNSAMGSSIEEEVEKAVWACRWGADTVMDLSTGTNIHQT REWILRNSPVPIGTVPMYQALEKAGGVAENLTWELYRDTLVEQAEQGVDYFTIHAGILQEHLPAAGRRMTGIVSRGGAIM AKWCKTNNRENFLYTHFDEICEILRSYDIAISLGDALRPGCIADANDEAQFGELKVLGELTLLAWEHDVQVMIEGPGHVP LNLVEENMRKQLELCHGAPFYTLGPLITDIAAGYDHINSAIGGTLIAAYGCSMLCYVTPKEHLGLPDKNDVREGVVVHKV AAHAADIAKGNPTAWLQDELMSRARYAFAWEDQFNLSLDPVKARVLYAESRAASGQTDGNPDFCTMCGPDFCSMKRSQEK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| BJAB07104_00317 | YP_008207782.1 | Thiamine biosynthesis protein ThiC | Not tested | AbaR25 | Protein | 3e-163 | 62 |
| BJAB0868_00321 | YP_008211647.1 | Thiamine biosynthesis protein ThiC | Not tested | AbaR26 | Protein | 3e-163 | 62 |
| thiC | YP_001598318.1 | thiamine biosynthesis protein ThiC | Not tested | MDA | Protein | 5e-156 | 60 |
