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Name : Clim_1588 (Clim_1588) Accession : YP_001943612.1 Strain : Chlorobium limicola DSM 245 Genome accession: NC_010803 Putative virulence/resistance : Virulence Product : NAD-dependent epimerase/dehydratase Function : - COG functional category : M : Cell wall/membrane/envelope biogenesis COG ID : COG0451 EC number : - Position : 1709836 - 1710846 bp Length : 1011 bp Strand : - Note : PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; dTDP-4-dehydrorhamnose reductase; Male sterility domain; KEGG: pvi:Cvib_1219 NAD-d DNA sequence : ATGAACGTTCTGGTTACCGGCGCAGCCGGTTTTATCGGTTCACATGTCTGTCAACGGCTTCTTGAAAGAGGAGAGCGTGT GACAGGGCTTGATAACCTGAATGATTATTATGATGTGAGCCTGAAGGAGGCCCGTCTTGACTGGCTCAGGCCATATGCTG ATTTCCGGTTTGTTAAAACCGATCTTGCCGACCGGCAGGGCATGGAAGAGCTTTTTCGCAAAGGCGGATTTGAAAAAGTG GTTAATCTTGCCGCTCAGGCCGGGGTTCGTTATTCCATTGTCAATCCGCACTCCTATGTCGAAAGCAATATTCTGGGATT TCTGAATATTCTCGAAGGGTGTCGTCATAACGGCGTGGAGCATCTCGTTTATGCATCGTCAAGTTCGGTCTACGGCGCGA ACGAAACTATGCCGTTTTCGGTGCACGACAATGTCGATCACCCGCTCTCTCTATACGCAGCCAGCAAGAAAGCCAACGAA CTGATGGCGCATACATACAGCCATCTCTACAACATTTCCGCAACAGGACTGCGCTTCTTTACCGTATATGGCCCGTGGGG ACGTCCCGATATGGCGCTCTTTCTCTTTACCGATGCCATTCTGAACAACCGCCCGATCAAGGTGTTCAACTATGGCAAAC ACCGGCGAGATTTCACCTACATCGACGACATCGTCGAGGGGGTGATCCGGACGCTCGATCACAATGCCGAAAGCAATCCT GAGTGGTCCGGGCTGCACCCTGATCCCGGATCGAGCCGTGCGCCGTGGAAGGTGTACAACATCGGCAACAGCCAGCCGGT CAACCTGATGGACTACATCGGGGCGCTCGAACGGCAGCTCGGCAAAACAGCGGAAAAGGAGTTTCTGCCCATGCAGCCGG GTGACGTGCCCGACACCTATGCCGATGTCGAGCAGCTCATACAGGATGTGCATTATAAACCGGAAACTACCGTGGAGGAA GGTGTCAGACGGTTTGTTGCCTGGTATCGGGATTATTATGATGTCAGGTAG Protein sequence : MNVLVTGAAGFIGSHVCQRLLERGERVTGLDNLNDYYDVSLKEARLDWLRPYADFRFVKTDLADRQGMEELFRKGGFEKV VNLAAQAGVRYSIVNPHSYVESNILGFLNILEGCRHNGVEHLVYASSSSVYGANETMPFSVHDNVDHPLSLYAASKKANE LMAHTYSHLYNISATGLRFFTVYGPWGRPDMALFLFTDAILNNRPIKVFNYGKHRRDFTYIDDIVEGVIRTLDHNAESNP EWSGLHPDPGSSRAPWKVYNIGNSQPVNLMDYIGALERQLGKTAEKEFLPMQPGDVPDTYADVEQLIQDVHYKPETTVEE GVRRFVAWYRDYYDVR |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| cap1I | AAA64648.1 | type 1 capsule synthesis gene | Virulence | SCCcap1 | Protein | 2e-100 | 60 |
