|
Name : rplS (Clim_1395) Accession : YP_001943434.1 Strain : Chlorobium limicola DSM 245 Genome accession: NC_010803 Putative virulence/resistance : Unknown Product : 50S ribosomal protein L19 Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG0335 EC number : - Position : 1501902 - 1502264 bp Length : 363 bp Strand : - Note : this protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site DNA sequence : ATGGATCAGTTAATTCAGTTAGTTGAAGCCACACAGAGCAGAACCGATTTTCCGGTGATCAATCCCGGTGATACCGTAAG GATCCAGCTGAAGGTTATCGAAGGCGAAAAAGAGAGACTGCAGGCTTATGAAGGTGTCGTTATCAGCGACAGAGGCGCTG GCGCATCAAAAACCATCACCGTTCGCAAGATTTCTCATGGCGTCGGTGTTGAAAGAATCATTCCTGTCAACTCTCCGAAC GTCGAGAGCGTTACCGTTCTGAAGCACGGCAAGGCAAGAAGGGCAAAACTCTTCTATCTTCGCAAGCGTACCGGTAAAGC CGCTCTCAAGGTCAAAGAGCGCAAGTTCCCTGTCAAAGCCTGA Protein sequence : MDQLIQLVEATQSRTDFPVINPGDTVRIQLKVIEGEKERLQAYEGVVISDRGAGASKTITVRKISHGVGVERIIPVNSPN VESVTVLKHGKARRAKLFYLRKRTGKAALKVKERKFPVKA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| rplS | CAA68924.1 | ribosomal protein L19 | Not tested | Internalin | Protein | 7e-25 | 54 |
| rplS | AAS66827.1 | 50S ribosomal subunit protein | Not tested | SSR-1 | Protein | 4e-23 | 50 |
