Gene Information

Name : Clim_1304 (Clim_1304)
Accession : YP_001943349.1
Strain : Chlorobium limicola DSM 245
Genome accession: NC_010803
Putative virulence/resistance : Unknown
Product : integrase catalytic subunit
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG2801
EC number : -
Position : 1400925 - 1401701 bp
Length : 777 bp
Strand : -
Note : PFAM: Integrase catalytic region; KEGG: cph:Cpha266_2112 integrase, catalytic region

DNA sequence :
ATGAAAGCGCGTAAAAATTGGATCAGCGACAAAGAACAGTTGTCGGTATCTACCCAATGTGAACTTGCCGGAGTAACCCG
GTCAGGGTACTACGGGCAAAGTAAAAGCCTCATGCCAAATACTGAAGATCTGGAACTGATGAAGCTTATCGACGAGGAGT
ACACCCGACATCCGTTTTATGGAAGCCGACGGATGAAGCAGGTCCTGCTCACCCAAGGGCGCAAGGTCAACCGGAAACGA
GTACAGCGCCTGATGCGTAACCTGGGGCTTGCGGGTATGGCTCCAGGGCCCAATACCAGCAAACCGCATCCGCAGCACAA
GATCTATCCATACCTGTTGCGAGGTCTTGCCATTACCAGACCGAACCATGTCTGGTCGACCGATGTGACCTATTGCCGGT
TACCCGGCGGCTTTATGTATCTGACGGCTGTCATCGACTGGTATTCCCGCAAGGTGCTGGCATGGAGGCTTTCGAATTCC
CTGGATAGCAGCTTCTGTGTTGACTGCCTTGAGGAGGCGATCCGCAAGTATGGGACACCGGAAATCTTCAACACTGATCA
GGGCGTTCAGTACACCAGTGATGCGTTCACCAGCGTGCTCAAGAGCCATGAGATCCGCATCAGCATGGATGGCCGTGGCA
GGGCCTTGGACAATGTTTTCGTCGAGCGGTTATGGCGGAACGTCAAGCAGGAAGACCTGTACCTGAAAGGCTATGAAACA
GCGGTAGAAATGATGCGGGATTCATGTCAGAATAGAGTGCGTATCCGCATTTGTTGA

Protein sequence :
MKARKNWISDKEQLSVSTQCELAGVTRSGYYGQSKSLMPNTEDLELMKLIDEEYTRHPFYGSRRMKQVLLTQGRKVNRKR
VQRLMRNLGLAGMAPGPNTSKPHPQHKIYPYLLRGLAITRPNHVWSTDVTYCRLPGGFMYLTAVIDWYSRKVLAWRLSNS
LDSSFCVDCLEEAIRKYGTPEIFNTDQGVQYTSDAFTSVLKSHEIRISMDGRGRALDNVFVERLWRNVKQEDLYLKGYET
AVEMMRDSCQNRVRIRIC

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ABK1_0264 YP_005512836.1 insB Not tested AbaR4d Protein 4e-51 55
unnamed ACF06170.1 putative transposase Not tested Tn5036-like Protein 3e-57 52