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Name : clpC (BMULJ_06087) Accession : YP_001941876.1 Strain : Genome accession: NC_010801 Putative virulence/resistance : Virulence Product : ATP-dependent Clp protease ATP-binding subunit Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG0542 EC number : - Position : 817175 - 820036 bp Length : 2862 bp Strand : + Note : COG0542: ATPases with chaperone activity, ATP-binding subunit, Pseudomonas aeruginosa; ClpC protein; KEGG, K03696 DNA sequence : ATGCCCGCACTTTGCGACATCTGTCACGCCCGGCCCGCCGTTGCGCGCGCCACCGTGATGCAGGACGGCGAACGCAAGAC GATCTCGATCTGCGACTATCACTTCCGGCAGCTGATGCGCCATCAGAGCATGCTGAATCCGTTCGACTCGCTGCTCGGCG GCGGTCCGTCGTCGCTGTTCGGTGGCCTCGACGAAGCATCGCCGCTCGCCGCGGAAATCCCGCGCGAGTCGGTCGACCCC ACCGACGCGTTCAGCGAGCAGACGCTCGAGCTGCTGCAGCGCGCAGCCGAGAAGGCGCACGAGCTGCGCCGCAACGAACT CGACACCGAACACCTGCTGTACGCGCTCGCCGACACCGACGTATGTGCGGCACTGCTGAAGGAACTGAAGCTGTCGCCGC AGGACACCAAGGCCTACATCGACGAACACGCGCACACCGGCAACGCCGATCCGGACCAGTCGCTCGAGAAGCTGTCGATC TCGCCGCGCGTGAAGAAGGCCGTGCAGTACGCGTTCCAGGCGTCGCGCGATCTCGGCCATTCGTACATCGGGCCCGAGCA TCTGCTGATCGGGCTCGCATCGGTGCCGGACAGCATCGCCGGCACGCTGCTGAAGAAATACGGCGTGACGCCCGAGGCGC TGCGCCAGAAGGTTGTGAAGGTCGTCGGCAAGGGCGCCGAAGACGGCCGCGTCGACACGCCGACCGGCACGCCGAATCTG GACAAGTTCGGCCGCGACCTGACCGCGCTCGCGCGCCAGGGCAAGCTCGACCCCGTCCTCGGCCGCGCGCAGGAAATCGA AAGCGCGATCGAGGTGCTCGCGCGCCGCAAGAAGAACAACCCCGTGCTGATCGGCGAGCCGGGCGTCGGCAAGACGGCGA TCGTCGAAGGGCTCGCGCAGCGGATCGTCAACGGCGACGTGCCGGAAGTGCTGCGCGGCAAGCGCCTCGTCGAGGTCAAC ATCAATTCGATGGTCGCCGGCGCGAAATATCGCGGCGAGTTCGAGGAGCGCGCGAAGCAGCTGATCGACGAAGTCACCGC GAAGCAGGACGAACTGATCCTGTTCATCGACGAGCTGCATACGATCGTCGGCGCGGGGCAAGGCGGCGGCGAAGGCGGGC TCGACATCGCCAACGTACTGAAGCCCGCGCTCGCGCGCGGCGAGCTGAGCCTGATCGGTGCGACGACGCTGAACGAATAC CAGAAGTACATCGAGAAAGATGCGGCGCTCGAGCGGCGCTTCCAGCCCGTGTTCGTGCCGGAGCCGAGCGTCGAGCAGAC GATCGTGATCCTGCGCGGGCTGCGCGACAGCCTCGAAGCGCACCACCAGGTCACGTTCTCCGACGACGCGTTCGTCGGGG CCGCCGAATTCGCGGACCGCTACATCACCTCGCGCTTTCTGCCCGACAAGGCGATCGACCTGATCGATCAGGCGGCCGCG CGCGTGCGGATCGGCGCGACTTCGCGCCCGGTCGACATCCAGGAAGACGAAGCGCAGATCGCGCAGCTCAAGCGCGAGCA GGACTACGCGACCTCGCGCAAGCGCTTCGACGAGGCGAAGCAGTTCGAAGAACAGATCAACGCGAAACAGAAGGCGCTCG ACGAGAAGATGGAAGCGTGGCAGCGCAAGACCGGCTCCGAGACGCTCGAGGTCACGGTCGAATCGGTCGCCGAAGTCGTC TCGCGCCTGACCGGCATTCCGGTGTCCGAACTCACGCAGGAAGAGCGTCAGAAGCTGCTCAAGATGGAAGAGCAGCTGCG CGAGCGCGTGGTCGGACAGAACGACGCGGTGGTCGCGGTCAGCGATGCGGTGCGCCTGTCGCGCGCGGGGCTCGGCCAGA CGCACCGGCCGATCGCGACGTTCCTGTTCCTCGGGCCGACCGGCGTCGGCAAGACCGAGCTTGCGAAGGCGCTCGCCGAA AGCGTGTTCGGCGACGAGCAGGCGATCATCCGGATCGACATGTCCGAATACATGGAGCGGCACGCGGTCGCGCGGCTGAT CGGCGCGCCGCCCGGCTACGTCGGCTACGACGAAGGCGGTCAGCTGACCGAGCGCGTGCGGCGCCGCCCGTACAGCGTGA TCCTGCTCGACGAGATCGAGAAGGCACATCCGGACGTCTACAACGTGCTGCTGCAGGTGTTCGACGACGGCCGGCTCACC GACGGCAAGGGACGCGTCGTCGACTTCAGCAACACGATCATCATCGCGACGAGCAACCTCGGCGCGGCGATCATCATGGA CAACCTCACGCAGCCGGAAGCCGCGCGCAAGACCGACAAGGCGATCCGCGAAGAACTGATGCAGGTGCTGAAGGGCCACT TCCGCCCCGAGTTCCTGAACCGGATCGACGAAGTGATCGTGTTCCATGCGCTGTCGAAGGAGAACATCCGCTCGATCGTG CAGATCCAGCTCGATCGCGTCGTACGCACCGCGGCCGCGCAGGACATCCAGCTCGTGATGGGCGAATCGCTGATCGAGCA TCTGACCGAGGCGGGCTATCAGCCGGAATTCGGCGCGCGCGAACTGAAGCGTCAGGTGCGGCAGACGATCGAGACGCGGC TCGCGAAGGAAATCCTCGCGGACGCGCTGAAGTCGGGCGATCGCGTCGAGGTCGACTACGACAAGGACCGCGGCGAAGTG ACGTTCAACAAGCTGCCGCCGGCCGAGGCAACGGACGCAAAGGACGCCAAGGCCGCCAAGCAGGCCGGCAACGGCAGCGC GAAGGGCAACGGCAGTGCCGCTGCGGCCGATGGCCGACCCGACGGCGAGGCCGGCGCGAGCGACGGCGCGCCGGCCGAGG CACCGCCGCCCGCGAAGAAGTCCGGCAAGAAATCGTCCGGCGCGAAGAAGGACGCGCCGTGA Protein sequence : MPALCDICHARPAVARATVMQDGERKTISICDYHFRQLMRHQSMLNPFDSLLGGGPSSLFGGLDEASPLAAEIPRESVDP TDAFSEQTLELLQRAAEKAHELRRNELDTEHLLYALADTDVCAALLKELKLSPQDTKAYIDEHAHTGNADPDQSLEKLSI SPRVKKAVQYAFQASRDLGHSYIGPEHLLIGLASVPDSIAGTLLKKYGVTPEALRQKVVKVVGKGAEDGRVDTPTGTPNL DKFGRDLTALARQGKLDPVLGRAQEIESAIEVLARRKKNNPVLIGEPGVGKTAIVEGLAQRIVNGDVPEVLRGKRLVEVN INSMVAGAKYRGEFEERAKQLIDEVTAKQDELILFIDELHTIVGAGQGGGEGGLDIANVLKPALARGELSLIGATTLNEY QKYIEKDAALERRFQPVFVPEPSVEQTIVILRGLRDSLEAHHQVTFSDDAFVGAAEFADRYITSRFLPDKAIDLIDQAAA RVRIGATSRPVDIQEDEAQIAQLKREQDYATSRKRFDEAKQFEEQINAKQKALDEKMEAWQRKTGSETLEVTVESVAEVV SRLTGIPVSELTQEERQKLLKMEEQLRERVVGQNDAVVAVSDAVRLSRAGLGQTHRPIATFLFLGPTGVGKTELAKALAE SVFGDEQAIIRIDMSEYMERHAVARLIGAPPGYVGYDEGGQLTERVRRRPYSVILLDEIEKAHPDVYNVLLQVFDDGRLT DGKGRVVDFSNTIIIATSNLGAAIIMDNLTQPEAARKTDKAIREELMQVLKGHFRPEFLNRIDEVIVFHALSKENIRSIV QIQLDRVVRTAAAQDIQLVMGESLIEHLTEAGYQPEFGARELKRQVRQTIETRLAKEILADALKSGDRVEVDYDKDRGEV TFNKLPPAEATDAKDAKAAKQAGNGSAKGNGSAAAADGRPDGEAGASDGAPAEAPPPAKKSGKKSSGAKKDAP |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| clpC | YP_005163377.1 | ATP-dependent Clp protease ATP-binding subunit | Not tested | Not named | Protein | 2e-165 | 46 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| clpC | YP_001941876.1 | ATP-dependent Clp protease ATP-binding subunit | VFG0079 | Protein | 0.0 | 50 |
