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Name : kdsB (Minf_0956) Accession : YP_001939609.1 Strain : Methylacidiphilum infernorum V4 Genome accession: NC_010794 Putative virulence/resistance : Virulence Product : CMP-2-keto-3-deoxyoctulosonic acid synthetase Function : - COG functional category : M : Cell wall/membrane/envelope biogenesis COG ID : COG1212 EC number : - Position : 916173 - 916844 bp Length : 672 bp Strand : - Note : - DNA sequence : TTGGCCATGCTTGGTGGTAAGCCCTTAATCCAGTGGGCTTGGGAAAGAGCCATGGAATGTGAAAAAGCAAGCAAAGTAGT TATAGCGACGGATGACAAGAGAATTGCCGATGCGGTAAAAAAATTTGGGGCAGAGGTGGTCATGACCAAGCCCAGTCATC CTTCTGGTACAGATCGCGTTGCCGAGGTCGCCACCCTTTATCAGGCTGACACCTTCGTCAATTTTCAAGGGGATGAACCC TTTTTACCGGGAAAAGAAATTGATAGACTCCTCGATGCCATGGATAGCGCTCCCATTGCGACATTATCCCGAAAAATACA GGATCGTTCTGAAGAAAACGATCCCAACGTCGTAAAAGTCGTTTGCGATTTAGACGGTTTTGCTCTTTATTTTAGCAGGT CTCATATACCCTTTCTAAAAAATAAAAACTTGAATTATTCTATTCAGGCACATGTAGGGATATACGCTTTTTGCTCCTGG GCTTTACAAAAATTTGTATCCTTACCCTGTGGAATTTTAGAACAAGTGGAATCGTTGGAACAACTTAGAGCTTTAGAAAA CCGAATTCCCATAAAAGTCATTTCCACTCCCTATCAAACGCTTGCTATTGATTGCCCGGGGGACTTGTCAAAAGCCGAGC AAAAATTAAAACTAATGAAAGAACCATCATGA Protein sequence : MAMLGGKPLIQWAWERAMECEKASKVVIATDDKRIADAVKKFGAEVVMTKPSHPSGTDRVAEVATLYQADTFVNFQGDEP FLPGKEIDRLLDAMDSAPIATLSRKIQDRSEENDPNVVKVVCDLDGFALYFSRSHIPFLKNKNLNYSIQAHVGIYAFCSW ALQKFVSLPCGILEQVESLEQLRALENRIPIKVISTPYQTLAIDCPGDLSKAEQKLKLMKEPS |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| kpsU | AAZ04469.1 | CMP-KDO synthetase | Virulence | PAI I APEC-O1 | Protein | 6e-31 | 42 |
| kpsU | YP_854332.1 | 3-deoxy-manno-octulosonate cytidylyltransferase | Not tested | PAI I APEC-O1 | Protein | 8e-31 | 42 |
| kpsU | CAE85213.1 | KpsU protein | Virulence | PAI V 536 | Protein | 1e-30 | 41 |
