Gene Information

Name : kdpE (Minf_0759)
Accession : YP_001939412.1
Strain : Methylacidiphilum infernorum V4
Genome accession: NC_010794
Putative virulence/resistance : Virulence
Product : DNA-binding response regulator KdpE (REC-wHTH domains)
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 725086 - 725808 bp
Length : 723 bp
Strand : +
Note : -

DNA sequence : 
ATGAACAAGGATAAACAGATTCCGCTTTCCGTCCTGGTCATTGATGATGAACCGCAGATACTCAAACTTTTAAAACTGAT
CCTTGAGTCAAAGGGCTATAGGGTCTTTCTGGCCTCGACGGCTAAAGAAGGGATTTTGGAAACGGCCCAAAGAAGACCTA
ATATTATCATCCTCGATCTTCTCTTGCCGGACATGAACGGAACGGAGGTAATCCAGAGAATAAGGGAATGGAGCCAGGTC
CCGATTCTTGTGCTTTCGGCTGTCGATCAAGAAAGAGAGAAAGTCCAAGCTCTAGACAGTGGGGCCGATGATTATTTAAC
GAAGCCTTTTGGAGAAGAAGAGCTCATGGCCCGAATTAGGGTGCTTTTACGGAGGCTTCAGCCTCAAGCAGATCTCCAAG
TTTTTCGTACGGGTGGTCTTGAGGTGGACCTGGTTAATAGGAGGGTTTTTTTTCAAAAAAAGGAAATACGGCTTACGTCG
ACTGAATATGGAATATTGAGACTGCTGGTTCGTCATGCAGGTAAGGTATTAACGCATCGGCAGATATTACAGGAGGTTTG
GGGACCACGGGGCGTGGACCAGGTCCATTATCTGCGGGTCTATATGGCAAGGCTGAGAGAAAAGATTGAGGAAAATTCTC
TTCAACCTAAACTTCTTCTCACCGAACCGGGAATCGGGTATAGACTGATGATCTTGGATCCGGATCAAAATGGCATAAAA
TAA

Protein sequence : 
MNKDKQIPLSVLVIDDEPQILKLLKLILESKGYRVFLASTAKEGILETAQRRPNIIILDLLLPDMNGTEVIQRIREWSQV
PILVLSAVDQEREKVQALDSGADDYLTKPFGEEELMARIRVLLRRLQPQADLQVFRTGGLEVDLVNRRVFFQKKEIRLTS
TEYGILRLLVRHAGKVLTHRQILQEVWGPRGVDQVHYLRVYMARLREKIEENSLQPKLLLTEPGIGYRLMILDPDQNGIK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
EF0571 NP_814337.1 DNA-binding response regulator Not tested Not named Protein 3e-32 42
ef0091 AAM75294.1 EF0091 Not tested Not named Protein 2e-32 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
kdpE YP_001939412.1 DNA-binding response regulator KdpE (REC-wHTH domains) NC_012469.1.7685629. Protein 2e-25 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
kdpE YP_001939412.1 DNA-binding response regulator KdpE (REC-wHTH domains) VFG1390 Protein 4e-28 41