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Name : atoC (Minf_0356) Accession : YP_001939013.1 Strain : Methylacidiphilum infernorum V4 Genome accession: NC_010794 Putative virulence/resistance : Virulence Product : DNA-binding response regulator, NtrC family (contains REC, AAA-type ATPase, and DNA-binding Fis domains) Function : - COG functional category : T : Signal transduction mechanisms COG ID : COG2204 EC number : - Position : 361359 - 362819 bp Length : 1461 bp Strand : + Note : - DNA sequence : ATGACAAAAGAAAAAACAGCCGATTCTCCTCTTCCCCAGGACCAGGAAGAACCTGTTCTTCAATCCATTCTCATTGTCGA TGATGAAGAGGATGTTTTTTATTCTTTTCAAAGATTCCTTGAGGAGTTTCCCGTAAGGACGTTTAGTGCGAAATCAGGGG AAGAAGCTTTGAAGTTACTCAAGACCCAAGCTGTTGACGTCATCATTATGGATATCCGGATGGGGAAAAAAAGCGGTCTT GAAACCTTAAAAGAGATCAGGAAACTCTTTCCCCAGCAAGTCGTAGTTATCATGACGGCTTATGGAACTTGTCAAACGGC CATTGAAGCCATGAAAATGGGTGCCTACGACTACATATTAAAACCTTTCAACATGATCGAATTAAAATCGGTCATCACCA AGGCATTGGAAGCTTCAAAGCTGACCAAGGAAGTTTCTTCCCAAGCCTTCCCTGCGAACGCCTTCGACAGCCGCAGCCTG CATATCATAGGGAAAAGCGCTCCCATGCAGCAAGTTTACAAACTGATCGGGCAGGTAGCTCCCACCAATGCGACCGTGTT GATCGTCGGGGAAAGCGGTTCCGGTAAAGAGCTTGTTGCCCGAGCTATTTATCAATATAGTCTTAGGGCTAATAAGCCTT TTATAGCCATCAATTGTGCAGCGATTCCTGAAAATCTTCTTGAAAGTGAGCTTTTTGGCCACGAGAGAGGATCGTTTACA GGGGCCATGGCTCAGCGCATCGGCAAATTTGAACAGGGAGATGGAGGAACGGTATTCCTGGATGAAATAGGAGAAATGCC GATTTCCACTCAAGCTAAAATTTTAAGGGTACTCCAAGAAGGGGAATTCTCCAGGTTAGGGAGTAACGAACCCATCAAAA CGGATGTGCGGATTATAGCGGCGACCAACAAGGATCTTGCTGCCGCGGTAGCGAAAAGGGAATTTAGAGCGGATCTCTTT TACCGGCTCAACGTGGTCAAAATTTCCCTTCCTCCCTTAAGAGAAAGGGTTGAAGATATTCCCGATCTCATAGATCATTT TCTGGCTAAACATCGCCGTTATCTTCCCAATGCTCCTACTTGTATTTCTTCGCAGGCCATGAGGAGCCTGTTGGCTTATC ATTGGCCGGGAAACATAAGGGAGCTGGAAAACGTTATCCAGAGAGCGATGGTTCTTGCGACCAGTGCCACGATCCAGAAT TGTCATCTTCCAGAAGAAATCCAAGCGGCTGAAAAGAAAAAGTATTTTAAAGAGAAGTCCGGCAAAGGAGGTCCGGCTGG AGGATTAGATTTCCTCGTCCAGGAAATTGTGGGTTCAGATCTAAGAGATCATCGACTCGAAACTCTGAAAAGTTTATTGC ATAGGATTTATACTCAGGTTCTCGAAGAATGTGAAGGAGACGAATCCAAGGCAAAGAGAATCTTAGGGTTTCATTCCGCT TGGGTAAATACTTTAAAGTAG Protein sequence : MTKEKTADSPLPQDQEEPVLQSILIVDDEEDVFYSFQRFLEEFPVRTFSAKSGEEALKLLKTQAVDVIIMDIRMGKKSGL ETLKEIRKLFPQQVVVIMTAYGTCQTAIEAMKMGAYDYILKPFNMIELKSVITKALEASKLTKEVSSQAFPANAFDSRSL HIIGKSAPMQQVYKLIGQVAPTNATVLIVGESGSGKELVARAIYQYSLRANKPFIAINCAAIPENLLESELFGHERGSFT GAMAQRIGKFEQGDGGTVFLDEIGEMPISTQAKILRVLQEGEFSRLGSNEPIKTDVRIIAATNKDLAAAVAKREFRADLF YRLNVVKISLPPLRERVEDIPDLIDHFLAKHRRYLPNAPTCISSQAMRSLLAYHWPGNIRELENVIQRAMVLATSATIQN CHLPEEIQAAEKKKYFKEKSGKGGPAGGLDFLVQEIVGSDLRDHRLETLKSLLHRIYTQVLEECEGDESKAKRILGFHSA WVNTLK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| BJAB07104_00300 | YP_008207765.1 | Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains | Not tested | AbaR25 | Protein | 5e-61 | 41 |
| BJAB0868_00304 | YP_008211630.1 | Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains | Not tested | AbaR26 | Protein | 5e-61 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| atoC | YP_001939013.1 | DNA-binding response regulator, NtrC family (contains REC, AAA-type ATPase, and DNA-binding Fis domains) | BAC0467 | Protein | 7e-79 | 48 |
| atoC | YP_001939013.1 | DNA-binding response regulator, NtrC family (contains REC, AAA-type ATPase, and DNA-binding Fis domains) | BAC0089 | Protein | 5e-81 | 45 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| atoC | YP_001939013.1 | DNA-binding response regulator, NtrC family (contains REC, AAA-type ATPase, and DNA-binding Fis domains) | VFG1249 | Protein | 1e-69 | 46 |
| atoC | YP_001939013.1 | DNA-binding response regulator, NtrC family (contains REC, AAA-type ATPase, and DNA-binding Fis domains) | VFG0116 | Protein | 8e-67 | 43 |
| atoC | YP_001939013.1 | DNA-binding response regulator, NtrC family (contains REC, AAA-type ATPase, and DNA-binding Fis domains) | VFG1214 | Protein | 5e-64 | 41 |
