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Name : clpA (Minf_0241) Accession : YP_001938900.1 Strain : Methylacidiphilum infernorum V4 Genome accession: NC_010794 Putative virulence/resistance : Virulence Product : ATP-binding subunits of Clp protease and DnaK/DnaJ chaperones Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG0542 EC number : - Position : 239145 - 241655 bp Length : 2511 bp Strand : - Note : - DNA sequence : ATGACAAACTTCACTCCTAGAGCACAACAAGTTCTGGCTCTTGCAAGGCAAGAAGCCGAAAGATTTGGGCATAATCATGT CGGGACTGAGCATCTTTTGCTCGGTTTAATTAAACTTGCCCAAGGAGTAGCCATTAATGTCCTGCAAAAACTTGGAGTGG ATCTTGAAATTATCCGTGTCGAGATAGAAAAAAAGATAGCTTCCGTCCCTTCTGAAGGTAAACCCACAGCTCCCATTCCC TACACTCCCCGGGTAAAAAAAGTTTTAGCCCTTGCGGGGAAAGAAGCCAAAGCCTTAAACCATAGCTATGTGGGTACCGA GCATATCCTTTTAGGTCTTCTTCGCGAAGGAGAAGGAGTAGCGGCTACGATATTAAAGAATCTTGATATCGATCTTGAAC GGGTAAGGAATGAAATTTTAAAAGAACTGGATCCCAATTTTTCTTCCAGCGGTGAAGAAGAGAGTCCTGAACCCGCTTTT GCAGGAACCACTGAAACAACCACGAAAAAGGAAGTCAAAACCCCGGCATTAAAAGCATTTGGGCGAGATCTCACCGAACT GGCCCGCCGGGGAGAACTCGATCCAGTCATTGGCAGAAAAAATGAGATCGAGAGGGTGATGCAGATTCTTTGTAGAAGAA CTAAAAATAACCCTGTCCTGATTGGAGAAGCGGGAGTAGGGAAAACAGCCATAGTAGAAGGACTGGCGCAAGAAATCGCA AACGAAAATGTGCCCGACCTGTTAAGAGACAAAAAGATAATCACCCTTGATCTCGCCTTGATGGTTGCCGGAACCAAGTA TAGGGGGCAATTTGAAGAGAGAATAAAAGCGGTGATGGAGGAAATCCGCAAGGCAAAGAACATCATCCTCTTTATAGATG AGCTTCATACCATTGTTGGAGCCGGATCCGCTGAAGGGGCCATGGATGCTTCCAATATCATCAAACCAGCCTTATCCAGG GGTGAGCTTCAGTGCATAGGAGCGACTACCCTTTCTGAGTACCGTAAATACATAGAAAAAGATGCTGCCTTAGAAAGGAG ATTCCAAACCGTCCTTGTGGAGGCTCCGAGTGTTGAAGAAACCATCCAGATTCTTCATGGGCTGAAAGCCAAATATGAAA TGCATCACAAGGCCAAGTTCACCGATCAAGCTATCGATACCGCCGTCCGGCTTTCGGATAGATACCTGACAGGGAGGTTT TTGCCTGATAAGGCTATTGATATTATGGATGAAGCGGGCGCAAGGGCTAGAATAGCCGCTACCATGAGACCCCCCGAGCT GAAAGACCTTGAAAACGAACTGGCTTCCATTAGGGCTAAAAAGGATGAATGCATAAAAGCCCAAAATTTTGAAAAGGCAG CAGCTTTAAGGGATAAGGAAAGAGAACTGAAAGAAAAACTTGAACAAAAAATTGCCGATTGGAAAAAGCGCAGAGACGAA AAAGAAACGACCATTACCGAAGATGACATGATGCAGATCGTCTCCAAATGGACCGGGATACCTATTACCCGAATCACAGA AAACGACCAAAGTAAATTCCTCAATGTAGGAGCAGAATTAAGGAAAAGAGTTATTGGCCAAGATGAAGCAATAGAAGCTT TGAGCCGGGCTTTACAACGTTCTAGGGCCGATCTCAAAGATCCCAAGAGGCCCATCGGTTCTTTCATATTCCTTGGTCCT ACAGGAGTGGGAAAGACGATGCTTGCAAAGACACTTGCCGAGTATGTCTTTGGTAGTGCTGAAGCTCTTATTCAGATTGA CATGAGCGAGTACATGGAGAAATTCAACGTGTCTCGACTCATCGGTTCTCCTCCAGGTTATGTCGGGTACGAGGAAGGAG GACAGCTTACCGAGAAAATTCGTCGTCGGCCTTATTCGGTTGTTCTTTTCGATGAGATCGAAAAGGCGCATCCCGACGTT TGGAATATCCTCTTGCAAATTCTTGAAGATGGTATTGTTACAGACAGCCTGGGTAGAAAAATAGACTTCCGGAATACCAT CATCATTATGACTTCTAATGTAGGTGCTGAAATGGGGCTCAAGCCCGGGGTTTTGGGATTTCGCTCCAAGCAGGATGAAG TTTCCTATGAGCAGATGAAAGAAAGGATGATGGAAACTGTAAAAAGGACTTTCAAACCGGAGTTTTTAAACCGCGTTGAT GACATTATTGTCTTCAGATCCCTGAATCGAGAGGACATGGTTAAAATCGTGCAATTGGAAGTCAATAAAGTCGCAGAAAG ACTGAAAAGTAAAAAGCTGAGCATTCAACTTACAGAAGCGGCAATTGATTTCTTAATCGAAAAGGGATACGAACCCGCTT ATGGAGCAAGACCCTTGAGAAGAGCTGTAGAAAAATACGTTGAAAATGCTATAGCAGAAGAGTTGCTCAAGGGGAAGTTT GCAGAATCCACGGTAGTCGAAGTCGATGCTCGAGAAGGGATGTTGATCTTTACTCCTAAACAAGCCCCGATCGAGTCTTC TTCTCAATCCCAAGTTGAATCAACTGTTTAA Protein sequence : MTNFTPRAQQVLALARQEAERFGHNHVGTEHLLLGLIKLAQGVAINVLQKLGVDLEIIRVEIEKKIASVPSEGKPTAPIP YTPRVKKVLALAGKEAKALNHSYVGTEHILLGLLREGEGVAATILKNLDIDLERVRNEILKELDPNFSSSGEEESPEPAF AGTTETTTKKEVKTPALKAFGRDLTELARRGELDPVIGRKNEIERVMQILCRRTKNNPVLIGEAGVGKTAIVEGLAQEIA NENVPDLLRDKKIITLDLALMVAGTKYRGQFEERIKAVMEEIRKAKNIILFIDELHTIVGAGSAEGAMDASNIIKPALSR GELQCIGATTLSEYRKYIEKDAALERRFQTVLVEAPSVEETIQILHGLKAKYEMHHKAKFTDQAIDTAVRLSDRYLTGRF LPDKAIDIMDEAGARARIAATMRPPELKDLENELASIRAKKDECIKAQNFEKAAALRDKERELKEKLEQKIADWKKRRDE KETTITEDDMMQIVSKWTGIPITRITENDQSKFLNVGAELRKRVIGQDEAIEALSRALQRSRADLKDPKRPIGSFIFLGP TGVGKTMLAKTLAEYVFGSAEALIQIDMSEYMEKFNVSRLIGSPPGYVGYEEGGQLTEKIRRRPYSVVLFDEIEKAHPDV WNILLQILEDGIVTDSLGRKIDFRNTIIIMTSNVGAEMGLKPGVLGFRSKQDEVSYEQMKERMMETVKRTFKPEFLNRVD DIIVFRSLNREDMVKIVQLEVNKVAERLKSKKLSIQLTEAAIDFLIEKGYEPAYGARPLRRAVEKYVENAIAEELLKGKF AESTVVEVDAREGMLIFTPKQAPIESSSQSQVESTV |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| clpC | YP_005163377.1 | ATP-dependent Clp protease ATP-binding subunit | Not tested | Not named | Protein | 0.0 | 50 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| clpA | YP_001938900.1 | ATP-binding subunits of Clp protease and DnaK/DnaJ chaperones | VFG0079 | Protein | 0.0 | 54 |
| clpA | YP_001938900.1 | ATP-binding subunits of Clp protease and DnaK/DnaJ chaperones | VFG0080 | Protein | 2e-146 | 50 |
