Gene Information

Name : putA (Minf_1839)
Accession : YP_001940491.1
Strain : Methylacidiphilum infernorum V4
Genome accession: NC_010794
Putative virulence/resistance : Virulence
Product : NAD-dependent aldehyde dehydrogenase
Function : -
COG functional category : C : Energy production and conversion
COG ID : COG1012
EC number : -
Position : 1715610 - 1717148 bp
Length : 1539 bp
Strand : -
Note : -

DNA sequence :
TTGGCAAAGGAGGTATTGATGCTAACAGAAACTTCAACTGAAAAATCCCAGGCCTTATCATACAGTCTTTTACCCAAGGT
TCAGGACTTTCTTAAGTCTCCAAAAAAGTTATTTATCGGCGGCAATTGGGTAGATGCCGTCTCCGGAAAAACGTTTCCAA
CCTATGATCCCGCTACGGGAGAAGTACTAGCCTTTGTAGCCGAAGCCGATAAAGAGGACGTGGATAAAGCGGTTAAAGCG
GCTAGGGAAGCTTTTGAAAAAGGACCGTGGAGCAAAATGACGCCTGCCGAAAGGGGCAAGTTAATATGGAAGCTTGCCGA
TTTGATCGAAGAAAACCTGGAAGAGTTAGCCCAAGTTGAATCTTTGGACAACGGTAAACCCATGTCCGTGGCCAGGGTTG
CAGACCTCCCCTTGTCCATCGATCTTTTCCGGTACATGTCGGGATGGGCGACGAAAATAGAAGGGGAGACGATCCCTTTT
TCCCTGGCTTCTCCAGAAAAATTTTTTGCTTATACAAGGAGAGAACCTATTGGAGTAGTGGGGCAGATCATTCCTTGGAA
TTTTCCCTTGTTGATGGCTGCTTGGAAATTAGGCCCTGCATTAGCTACGGGTTGCACGGTTGTTCTCAAGCCGGCCGAAC
AAACCCCTCTTTCCGCTTTGTGGCTAGGGGAGCTTATTCAGCAAGCCGGTTTCCCCGACGGGGTTGTTAATATTTTGCCC
GGTTTTGGTGAAACGGCGGGTGCGGCGATCGCTTCTCACATGGATATCGACAAGGTTGCATTTACCGGTTCAACAGAAGT
GGGCAAGATTATCGTTAAAGCGGCAACTTCAAATCTGAAAAAGGTCAGTCTTGAACTCGGGGGCAAATCTCCAAACATCA
TCTTTGCCGATGCAGATTTGTCAACGGCTATTCCGGGAGCCGCTTCCGCCATATTTTTTAATCATGGCCAATGTTGCTGT
GCAGGAAGCAGGCTTTATATAGAAAAGAAAGCTTTTGATAAAGTCCTGGCGGGAATAACCGAAGAGGCTAAAAAAATTCG
CCTTGGCCCTGGTCTTGAACCCTCGACGGAGATGGGACCTCTTGTTTCCCAAGAACAATACGACAGGGTTTTTTCTTACA
TTCGTTCCGGAATGGATGAAGGAGCGACCGTAGTTACCGGGGGGAAGCGCTATGGAGAGAAAGGCTATTTTATAACTCCC
ACCATTTTTACCGGGGTGAATCCCTCCATGAAAATTGTGAATGAGGAAATTTTTGGACCCGTTGTTTGTGCTGCTCCTTT
TGAAGATACCGAAGAGATTACCCCGGTGGCCAACCAGACCATATACGGCCTTGCGGCAGGAATATGGACAAGAGATATTT
CAAAAGCCCATCGGCTCGCCTCAAAACTGAAAGCGGGAACGGTCTGGATAAATTGTTATAATGTTTTTGATGCCTCTTTA
CCTTTTGGAGGTTATAAACAGTCGGGATGGGGGAGAGAAATGGGGCATGCGGTACTCGAGAACTACCTGGAAACAAAAAC
CGTCTGTATTCAACTTTAA

Protein sequence :
MAKEVLMLTETSTEKSQALSYSLLPKVQDFLKSPKKLFIGGNWVDAVSGKTFPTYDPATGEVLAFVAEADKEDVDKAVKA
AREAFEKGPWSKMTPAERGKLIWKLADLIEENLEELAQVESLDNGKPMSVARVADLPLSIDLFRYMSGWATKIEGETIPF
SLASPEKFFAYTRREPIGVVGQIIPWNFPLLMAAWKLGPALATGCTVVLKPAEQTPLSALWLGELIQQAGFPDGVVNILP
GFGETAGAAIASHMDIDKVAFTGSTEVGKIIVKAATSNLKKVSLELGGKSPNIIFADADLSTAIPGAASAIFFNHGQCCC
AGSRLYIEKKAFDKVLAGITEEAKKIRLGPGLEPSTEMGPLVSQEQYDRVFSYIRSGMDEGATVVTGGKRYGEKGYFITP
TIFTGVNPSMKIVNEEIFGPVVCAAPFEDTEEITPVANQTIYGLAAGIWTRDISKAHRLASKLKAGTVWINCYNVFDASL
PFGGYKQSGWGREMGHAVLENYLETKTVCIQL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
VC0819 NP_230467.2 aldehyde dehydrogenase Not tested VPI-1 Protein 6e-94 49
aldA AAC12273.1 aldehyde dehydrogenase Virulence VPI Protein 3e-97 49
aldA AAK20747.1 aldehyde dehydrogenase Virulence VPI Protein 3e-97 49
aldA AAK20776.1 aldehyde dehydrogenase Virulence VPI Protein 3e-97 49
aldA-1 YP_001216300.1 aldehyde dehydrogenase Not tested VPI-1 Protein 8e-97 49
ORF SG19 AAN62241.1 putative aldehyde dehydrogenase Not tested PAGI-3(SG) Protein 7e-88 45
hpaE AAO17179.1 HpaE Not tested tcd island Protein 8e-84 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
putA YP_001940491.1 NAD-dependent aldehyde dehydrogenase VFG0082 Protein 2e-94 49