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Name : lysU (Minf_1296) Accession : YP_001939948.1 Strain : Methylacidiphilum infernorum V4 Genome accession: NC_010794 Putative virulence/resistance : Virulence Product : Lysyl-tRNA synthetase (class II) Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG1190 EC number : - Position : 1208992 - 1210530 bp Length : 1539 bp Strand : + Note : - DNA sequence : GTGCATATACAGGGGAGATTAAGCTTTATCGTTATAACCACTTATGCAGGAAATCCAATAATGACTATGTCTTCGAACAC TGAATCGGAACTACTCAAAATTCGCAGGGAAAAACTCGATTATTGGAAATCTCAAGGAATCGACCCTTTTGGACACCCCT TTTTCGATACCCAGCCCATAGAATGCGTTCTTGAGCCGTTTAAAGAAAACCAATCCGTCCGGATTGCCGGCCGCATCCTT TCGATAAGAGACATGGGGAGGAGTTTTTTTGCGCATATTCAAGATCAAGGCTCTCAGATGCAGATTTATGCCAATCCCCA ATCTTGTGGGGAGATTGCTTTTAAGCAGCTCAAGCACTTGGACATCGGTGACATCGTTGGGGTTGAAGGGAGTTGTTTTT TTACAAAGACAAAGGAAAAGACGGTTAGGGTAAAGAGCTGGCAGCTCCTAGCCAAATCACTTCGCCCGCTCCCTTCTCAA TGGTATGGACTGCTGGATGTCGAAGCCCGGTACAGGCAAAGGTATCTGGATTTAATCATGAATCCTGAAGTCAAAAGAGT GTTTTTGAAACGAAGCCAAATCATCAAGGAAATCCGTGAGTTCTTACATAACAAGGGATTCATAGAGGTAGAAACCCCGA TGATGCAAACGGTAGCCGGAGGGGCAGCAGCCAATCCTTTCAAAACTTTTCATGAAGCCCTGGGTATTCCCCTTTACTTA AGGATAGCCCCCGAGCTCTACCTGAAAAGGCTCCTGGTAGGAGGGTTCGAGAAAATTTTTGAACTTAACCGTAATTTTCG TAACGAAGGAATTTCAAGAAAACATAACCCTGAATTTACGATGCTTGAAGCTTACTGGGCCTACGGGGATTGCCAATCGA TGGCTAAGCTCCTCGAAGAAATGATTGTAGCTGTAGCCCAAAAGGTATTTGGAACCTTGCAATTTCCCGCCTCAAAACAA TTCGGGGAAGCCAAAACCATCAACTTGACTCCTCCTTGGCCCAGGCGCCCTTTCAAAGAGGTCCTTTGTGAGGCTATTGG CGAAGATTGGTTCAGTTTGAGCGGGGAAGAAAAAATAAAGGTAGCAGCCCGCTTCGAAATCGAAATTAAAGAAGGATTCA CAGAAACTGACCTCTGCCGGCACCTTTTCGAAAAACAGGTCGAAGCAAAAACCATGGGCCCCCTATTTGTGACCGAACTG CCGACCGAATTCGTCCCTTTGGCCAAGCAGAAAAAAGAGGATCCCCGCTTTGTAGAGGTCTTTGAGCTGATCGTCAACGG CCAGGAACTTGCCCCGGGCTACAGCGAACTTAACGATCCCATAGTCCAGAGGGAAAGGCTCGAAAAACAAGCCGGGGAAG AAAAGCAAAAAATCGACGAGGAATTTCTTCTTGCCCTGGAATATGGCATGCCGCCTGCCGGAGGGATCGGGTTGGGAATC GATAGGCTGACCATGCTCTTATCCGGGCAGGAATCCATTCGGGATGTCATCCTTTTCCCCATTCTTCGTCCTAAAAAAGA GCAAAAAGAAACGGATTAA Protein sequence : MHIQGRLSFIVITTYAGNPIMTMSSNTESELLKIRREKLDYWKSQGIDPFGHPFFDTQPIECVLEPFKENQSVRIAGRIL SIRDMGRSFFAHIQDQGSQMQIYANPQSCGEIAFKQLKHLDIGDIVGVEGSCFFTKTKEKTVRVKSWQLLAKSLRPLPSQ WYGLLDVEARYRQRYLDLIMNPEVKRVFLKRSQIIKEIREFLHNKGFIEVETPMMQTVAGGAAANPFKTFHEALGIPLYL RIAPELYLKRLLVGGFEKIFELNRNFRNEGISRKHNPEFTMLEAYWAYGDCQSMAKLLEEMIVAVAQKVFGTLQFPASKQ FGEAKTINLTPPWPRRPFKEVLCEAIGEDWFSLSGEEKIKVAARFEIEIKEGFTETDLCRHLFEKQVEAKTMGPLFVTEL PTEFVPLAKQKKEDPRFVEVFELIVNGQELAPGYSELNDPIVQRERLEKQAGEEKQKIDEEFLLALEYGMPPAGGIGLGI DRLTMLLSGQESIRDVILFPILRPKKEQKETD |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | CAD66193.1 | putative lysil-tRNA synthetase LysU | Not tested | PAI III 536 | Protein | 2e-87 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| lysU | YP_001939948.1 | Lysyl-tRNA synthetase (class II) | VFG1668 | Protein | 1e-87 | 41 |
