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Name : rplS (OTT_0080) Accession : YP_001936772.1 Strain : Orientia tsutsugamushi Ikeda Genome accession: NC_010793 Putative virulence/resistance : Unknown Product : 50S ribosomal protein L19 Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG0335 EC number : - Position : 83875 - 84249 bp Length : 375 bp Strand : + Note : this protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site DNA sequence : ATGAATTTAATTAAGCAATTTGAACAAGAACAAATAAAAAAACTAACTCAAGGTAAAAGCATTCCTAATTTTAGACCTGG AGATACTGTAAAAGTCAACTTAAGAATTATTGAAGGAGCGAATGAAAGAATTCAAGCTTATCAAGGAGTTGTTATTGCTC GTGCTAATCGTTCAATATCTTCATCATTTACAGTTAGAAAAATTAGTCATGGCCAAGGTATAGAAAGAAAGTTTATGCTT TACTCTCCACTAATTAGCAGCATAGAGTTAATCAAGCAAGGAGTAGTAAGACGAGCTAAGCTATATTATTTAAGAAATCT ACAAGGTAGAAAAGCTAAAATTAGAGAAAAAATCTTTTCAAAAGATAACCAATAA Protein sequence : MNLIKQFEQEQIKKLTQGKSIPNFRPGDTVKVNLRIIEGANERIQAYQGVVIARANRSISSSFTVRKISHGQGIERKFML YSPLISSIELIKQGVVRRAKLYYLRNLQGRKAKIREKIFSKDNQ |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| rplS | CAA68924.1 | ribosomal protein L19 | Not tested | Internalin | Protein | 1e-25 | 54 |
| rplS | AAS66827.1 | 50S ribosomal subunit protein | Not tested | SSR-1 | Protein | 8e-27 | 53 |
