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Name : serS (OTT_0428) Accession : YP_001937120.1 Strain : Orientia tsutsugamushi Ikeda Genome accession: NC_010793 Putative virulence/resistance : Unknown Product : seryl-tRNA synthetase Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG0172 EC number : - Position : 444278 - 445567 bp Length : 1290 bp Strand : + Note : catalyzes a two-step reaction, first charging a serine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA DNA sequence : ATGCTGGACATAAAATGGATTAGAGCAAACCCAGATAAACTTGATGAATCACTAAGCAAACGAGGAATCGATTCAGTATC TAAATCAATAATACATATTGATTCAGAAAAAAGAACATTAATATCTCTAATTCAGAAATTACAGCATGAAAGAAAAGAAA AATCTAGTAGTGTAGCACATATTTATGACAAATCAAGTACTGATTTTGAAGAAATACAAAACGATGTTAAGCTGATCAAT CAAAAGATAACTGAATTAGAAACTTCATTATTGCATCATGAAAAAAGGTTATCTGAGATTATGGATAACCTTCCTAATTT AGTAGCTGATGATGTACCTTATGGTACTAATAGTGATATGAATAAAGTGCTTAAAGAATGTGGCACAATTCAAAATATCA AATTCCCAAAACATCATTATGAAATTGGAAAAAATTTAGGAATGATGGATTTTAATACAGCTACTAAGATGTCAGGAAGT AGGTTTGTAATTTTAAAACATGATCTTGCGAAACTTGAAAGAGCTTTAATCAATTTTATGATTGATGTACATACTACTGA GTTTAATTTTTTTGAAGTTTCTCCGCCATGCTTAGTTAAGGATCATGCTATGTATAATGTTGGCCAACTACCTAAATTTG CTGATGCATCATTTGAGACTACAACTGGATATAGATTGATACCTACTGCAGAAGTGCCATTAACTAATATTTTTGCTAAT ACTACTTTATTAGAAGAAAAATTACCAATAAGATTGGTAGCGTTTACTCCTTGCTTTAGATCAGAAGTAGGAAGCGCTGG TAAAGACGTTAAAGGTATGTTGCGAATGCATCAATTTGGCAAAGTAGAGCTTTTTACTATCGCTACACCTAAAGAATCAA ATAGAGAATTTGAGTATCTTACTGCTGCTGCTGAAAAAATTCTAGAGAAATTAGGGTTACCATATAGAGTAGTATTATTA TGTAGCGGTGATATAGGATTTGCAGCTCATAAAACATATGATCTTGAAGTGTGGTTACCAGCACAAAATTGTTATAGAGA AATTTCAAGCTGTTCACATTTTAGTTCTTTTCAAGCTAGAAGATCACTAAGTAAATATAGAGAACTTTGCTCTAAAAAAG TTAATTTTCTACATACAATCAATGGATCCGGACTTGCTGTTGGAAGAACTATAATTGCTATTCTAGAAAATTATCAAAAT TCAGATGGATCAGTTACAATTCCTGAAAAGCTTAGGAATTACATGGGAGGACAGAAACTGATTACACCTTTAACAGAAAC AGTATTTTGA Protein sequence : MLDIKWIRANPDKLDESLSKRGIDSVSKSIIHIDSEKRTLISLIQKLQHERKEKSSSVAHIYDKSSTDFEEIQNDVKLIN QKITELETSLLHHEKRLSEIMDNLPNLVADDVPYGTNSDMNKVLKECGTIQNIKFPKHHYEIGKNLGMMDFNTATKMSGS RFVILKHDLAKLERALINFMIDVHTTEFNFFEVSPPCLVKDHAMYNVGQLPKFADASFETTTGYRLIPTAEVPLTNIFAN TTLLEEKLPIRLVAFTPCFRSEVGSAGKDVKGMLRMHQFGKVELFTIATPKESNREFEYLTAAAEKILEKLGLPYRVVLL CSGDIGFAAHKTYDLEVWLPAQNCYREISSCSHFSSFQARRSLSKYRELCSKKVNFLHTINGSGLAVGRTIIAILENYQN SDGSVTIPEKLRNYMGGQKLITPLTETVF |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| serS | YP_003446791.1 | seryl-tRNA synthetase | Not tested | The aminoglycoside resistance gene cluster | Protein | 2e-93 | 47 |
