Gene Information

Name : BAbS19_I05960 (BAbS19_I05960)
Accession : YP_001934601.1
Strain :
Genome accession: NC_010742
Putative virulence/resistance : Virulence
Product : transcriptional regulator
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 621470 - 622177 bp
Length : 708 bp
Strand : +
Note : -

DNA sequence : 
ATGAAAATTCTCGTTATCGAAGATGACCGCGAAGCGGCCCGTTATCTGGAAAAGGCCTTTGCCGAGGCAGGGCATTCGGC
CGATATCGCGGGCGACGGCGAAACCGGCTACGCACTTGCCGAAAACGGCAATTACGATGTGCTGGTGGTGGACCGTATGC
TGCCCAAACGCGACGGCCTTTCCGTTGTGGCGGGCCTGCGCGCCAAGGGCATGGAAACGCCGGTCCTGATCCTGTCGGCG
CTTGGCGAGGTGGATGACCGCGTGACCGGTCTGCGCGCTGGGGGCGATGATTATCTCACCAAGCCCTATGCTTTTTCCGA
ACTTCTGGCGCGTGTCGAGGTCTTGCAGCGCCGCTCAAGCCCGCGCGAGGTGGATACGATCTACCGCGTCGGCGATCTGG
AGCTTGACCGCCTTGCGCATACTGCGCGCCGCCAGAGTGTTGATATTACGCTTCAACCGCGAGAATTTCGTCTTCTCGAA
TATCTCATGCGCCATGCCGGGCAGGTCGTCACCCGCACCATGCTGCTTGAAAACGTCTGGGATTACCACTTCGACCCGCA
GACCAATGTGATCGATGTTCACATTTCGCGGCTGCGCTCCAAGATTGAAAAGGGCTTTGACGAGCCGCTGCTTCATACGG
TGCGCGGGGCTGGCTATATGCTGAAGGCGGGCCGGGGCAAGCAATCCGCTGCCGCAAGGGCGGAATGA

Protein sequence : 
MKILVIEDDREAARYLEKAFAEAGHSADIAGDGETGYALAENGNYDVLVVDRMLPKRDGLSVVAGLRAKGMETPVLILSA
LGEVDDRVTGLRAGGDDYLTKPYAFSELLARVEVLQRRSSPREVDTIYRVGDLELDRLAHTARRQSVDITLQPREFRLLE
YLMRHAGQVVTRTMLLENVWDYHFDPQTNVIDVHISRLRSKIEKGFDEPLLHTVRGAGYMLKAGRGKQSAAARAE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
copR NP_460069.2 transcriptional regulatory protein YedW Not tested SPI-5 Protein 8e-38 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
BAbS19_I05960 YP_001934601.1 transcriptional regulator BAC0125 Protein 4e-51 48
BAbS19_I05960 YP_001934601.1 transcriptional regulator BAC0083 Protein 5e-47 48
BAbS19_I05960 YP_001934601.1 transcriptional regulator BAC0197 Protein 2e-45 47
BAbS19_I05960 YP_001934601.1 transcriptional regulator BAC0111 Protein 7e-55 45
BAbS19_I05960 YP_001934601.1 transcriptional regulator BAC0347 Protein 1e-47 45
BAbS19_I05960 YP_001934601.1 transcriptional regulator BAC0308 Protein 5e-46 44
BAbS19_I05960 YP_001934601.1 transcriptional regulator BAC0638 Protein 1e-37 44

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
BAbS19_I05960 YP_001934601.1 transcriptional regulator VFG1389 Protein 1e-35 45
BAbS19_I05960 YP_001934601.1 transcriptional regulator VFG0596 Protein 3e-38 41