|
Name : SYO3AOP1_0932 (SYO3AOP1_0932) Accession : YP_001931113.1 Strain : Sulfurihydrogenibium sp. YO3AOP1 Genome accession: NC_010730 Putative virulence/resistance : Resistance Product : Arsenical pump membrane protein Function : - COG functional category : P : Inorganic ion transport and metabolism COG ID : COG1055 EC number : - Position : 968507 - 969805 bp Length : 1299 bp Strand : - Note : PFAM: Arsenical pump membrane protein; Citrate transporter; KEGG: sau:SAP017 arsenic efflux pump protein DNA sequence : ATGAGTAATCTAATCTCTTATCTTTTATTCTTCATTGTATTATTTTTTATCATAAAAAAGCCATTTAATATAGGCATTGG GTGGACTGCAACGGTTGGGGCAATTTTAGCATTAATTCTTGGTGTAGTATCAATAAAGGATGTTTACAGGGTTGTAGAGA TAGTTTGGGACCCAACCTTAGCATTCTTGGGAATCATTTTTATATCAATCATTCTTGATAAAATTGGATTTTTTGAATGG GCTGCACTGCATATGATAGAGCTTTCAAAGGGCGATGGAAGAGTTTTATTTATATATCTTTTACTTCTTGGAGCTTCAAT CTCTGCATTCTTTGCAAACGATGGAGCAGCATTAATTCTAACACCAATTGTTTATCAAAAGATAAAACATCTTGGACTAA GTCAAAAATATATGCTTCCATACATAATGGGAAGTGGATTTGTAGCAGATACAACAAGCCTACCGTTTGTAATTTCTAAT CTTGTAAACATACTTACAGCAGACTTTTTTAAGATAGGATTTTTTGAATATGCTTCTGTAATGGTTTTTGTAAATATCTT TTCTTTTGTTGCAACCATAATTTTTACCTATCTATTTTTCAGAAAAGATTTAATAAAGAAAATTGATTTAGAAGCCATGG AAGACAAACCACCAAAATACGCCATAAAAGACAAATTTCTATTTAAGCTTACATGGATTATCTCTGCATTTTTATTAGTT GCTTTCTTTGTAGGAGAACATTATAAAATTCCGACTTCCGTTATAATCGGACTTGGAGCTGTAATTTTTGCCATCGCTTC ATTAAAAGAAAGAGTTATTGATTTAAAGTTTGTTTTAACAAAAGAGACACCATGGCATATTGTTGTTTTCTCGGTTGGAA TGTATGTTGTAGTCTATGGTCTAAAAAATGCAGATTTTACCAATATCTTAGCTGAAATTATAGCCAAGTCAGCAGAGTAT GGAAATTTTGCAAGTATTTTTACAACCGGATTTTTAGCAGCGTTTTTATCTTCTGTGATGAACAATTTACCATCCGTAAT GCTTGTTAACCTTGCCATAGAAGAAGCAAACTTACCTATACAAACAGCAAAAATATTGGCTTATTCAAACATTATTGGGT GTGATTTAGGACCAAAAATAACACCGATAGGTTCTTTGGCTACTCTTTTGTGGTTGTATGTACTTAATAATAAAGGAATA AATATTTCATGGGGATATTATTTTAAAGTTGGTATAATTCTGACAATTCCAACGTTGATTTTTACTTTATTTGGACTTTG GTTAGTGATAAATCTTTAA Protein sequence : MSNLISYLLFFIVLFFIIKKPFNIGIGWTATVGAILALILGVVSIKDVYRVVEIVWDPTLAFLGIIFISIILDKIGFFEW AALHMIELSKGDGRVLFIYLLLLGASISAFFANDGAALILTPIVYQKIKHLGLSQKYMLPYIMGSGFVADTTSLPFVISN LVNILTADFFKIGFFEYASVMVFVNIFSFVATIIFTYLFFRKDLIKKIDLEAMEDKPPKYAIKDKFLFKLTWIISAFLLV AFFVGEHYKIPTSVIIGLGAVIFAIASLKERVIDLKFVLTKETPWHIVVFSVGMYVVVYGLKNADFTNILAEIIAKSAEY GNFASIFTTGFLAAFLSSVMNNLPSVMLVNLAIEEANLPIQTAKILAYSNIIGCDLGPKITPIGSLATLLWLYVLNNKGI NISWGYYFKVGIILTIPTLIFTLFGLWLVINL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| arsB | YP_005754065.1 | arsenical pump membrane protein | Not tested | Type-XI SCCmec | Protein | 9e-84 | 54 |
| arsB | YP_252017.1 | arsenical pump membrane protein | Not tested | SCCmec | Protein | 2e-84 | 54 |
| arsB2 | YP_001007633.1 | arsenical pump membrane protein | Not tested | YAPI | Protein | 3e-84 | 53 |
| SH0109 | YP_252024.1 | arsenical pump membrane protein | Not tested | SCCmec | Protein | 3e-87 | 52 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| SYO3AOP1_0932 | YP_001931113.1 | Arsenical pump membrane protein | BAC0574 | Protein | 2e-86 | 55 |
| SYO3AOP1_0932 | YP_001931113.1 | Arsenical pump membrane protein | BAC0575 | Protein | 3e-88 | 54 |
| SYO3AOP1_0932 | YP_001931113.1 | Arsenical pump membrane protein | BAC0576 | Protein | 3e-84 | 53 |
| SYO3AOP1_0932 | YP_001931113.1 | Arsenical pump membrane protein | BAC0031 | Protein | 2e-80 | 52 |
| SYO3AOP1_0932 | YP_001931113.1 | Arsenical pump membrane protein | BAC0578 | Protein | 2e-82 | 52 |
| SYO3AOP1_0932 | YP_001931113.1 | Arsenical pump membrane protein | BAC0577 | Protein | 2e-82 | 51 |
