Gene Information

Name : hemC (SYO3AOP1_0690)
Accession : YP_001930880.1
Strain : Sulfurihydrogenibium sp. YO3AOP1
Genome accession: NC_010730
Putative virulence/resistance : Unknown
Product : porphobilinogen deaminase
Function : -
COG functional category : H : Coenzyme transport and metabolism
COG ID : COG0181
EC number : 2.5.1.61
Position : 709177 - 710109 bp
Length : 933 bp
Strand : +
Note : transformation of porphobilinogen to hydroxymethylbilane in porphyrin biosynthesis

DNA sequence :
ATGAAAATAAGAATTGGAACAAGAAAAAGTCAATTAGCTTTATGGCAAGCAAATTACATTGCAGATAGATTGAGAGAAAT
TCACGGGATAGAAGTTGAGCTTGTTAAAATCACTACCCAAGGAGATAAAATCTTAGATGTTCCACTTGCAAAGATAGGCG
GAAAAGGATTATTTGTAAAAGAAATAGAAGATGCACTTCTTAGAAATGAAATAGATATTGCCGTCCACTCATTAAAAGAT
GTGCCAACAGTACTACCAGAAGGATTAGAGCTTATAGCAATTACAGAAAGAGAAGACCCAAGGGATGCCTTTTTATCTAT
AAGGTATGAAAACATCTACCAGCTTCCGGAAAACACAGTTATTGGCACAAGTAGCTTAAGAAGAAAATCACAAATAATGA
AAATCAGAAAAGATTTACAGATAAAAGATTTAAGAGGAAATGTTGACACAAGAATAAGAAAGCTTGAAGAAGGGCAGTAT
GACGCAATCATCCTTGCCTATGCAGGGCTAAAAAGACTTGGTCTTGATAGTAAAGTCAAATACATATTTTCTCCGGATGA
AATGATACCGGCGGTCTGTCAAGGCTTTCTTGCCATAGAAGGAAGGTCTGATGATGAGAGAATAAAAAATCTAATAAAAC
CACTGAACCATTATGAAAGCTATTTGAGAGCAACCGCAGAAAGAAGCTTTCTGAAAACGTTGGAAGGTGGATGTCAAGTT
CCACTTGGCGCATACTGTGAGATTAAAGAAAACAGCTTTATAATCACAGGCTTCATTGCAGACTTGGAAGGAAAAGAATA
TTATCAGGAAAAAATGATAGAACAAATAAAAGAAAATCCACAAGAGCAGGCTATCATTCTTGGAAAAACCTTAGCAGAAA
AACTTTTAAACGATGGTGGTAAACAAATTCTAACCAAAATTTATGGAAAATGA

Protein sequence :
MKIRIGTRKSQLALWQANYIADRLREIHGIEVELVKITTQGDKILDVPLAKIGGKGLFVKEIEDALLRNEIDIAVHSLKD
VPTVLPEGLELIAITEREDPRDAFLSIRYENIYQLPENTVIGTSSLRRKSQIMKIRKDLQIKDLRGNVDTRIRKLEEGQY
DAIILAYAGLKRLGLDSKVKYIFSPDEMIPAVCQGFLAIEGRSDDERIKNLIKPLNHYESYLRATAERSFLKTLEGGCQV
PLGAYCEIKENSFIITGFIADLEGKEYYQEKMIEQIKENPQEQAIILGKTLAEKLLNDGGKQILTKIYGK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00327 YP_008207792.1 Porphobilinogen deaminase Not tested AbaR25 Protein 4e-72 53
BJAB0868_00331 YP_008211657.1 Porphobilinogen deaminase Not tested AbaR26 Protein 4e-72 53