Gene Information

Name : rph (SYO3AOP1_0523)
Accession : YP_001930717.1
Strain : Sulfurihydrogenibium sp. YO3AOP1
Genome accession: NC_010730
Putative virulence/resistance : Unknown
Product : ribonuclease PH
Function : -
COG functional category : J : Translation, ribosomal structure and biogenesis
COG ID : COG0689
EC number : 2.7.7.56
Position : 534190 - 534963 bp
Length : 774 bp
Strand : +
Note : RNase PH; tRNA nucleotidyltransferase; forms hexamers in Bacillus subtilis; phosphoroltic 3'-5' exoribonuclease; involved in maturation of tRNA precursors and removes terminal nucleotides near CCA acceptor arms of mature tRNAs

DNA sequence :
TTGAGACCAGACGGTAGAAAACCTGCTCAACTTCGTCCTATAAAAATTATTAGAGACTTCAATATCTACGCAGAAGGTTC
AGTCCTAATAGAATTTGGAAATACAAAGGTTATAGTTACTGCATCTGTTGAGGATAAAGTTCCACCTTTCTTAAAAGGTA
CAGGTCAAGGTTGGATTACTGCTGAGTATTCAATGATTCCAAGAGCATCGGAAACAAGAAGTCTTAGAGAAGTAGTTAGA
GGTTCACCATCTGGCAGGACTCATGAAATACAAAGACTGATAGGAAGAAGCTTGAGGGCTGCGGTTGACCTTAAAAAACT
TGGAGAAAAAACAATTTGGATAGATTGCGATGTTATTCAGGCGGACGGTGGCACAAGGGTAGCATCTATTACAGGGGCAT
TTATAGCAGTTGCTGATGCTTGTATAAAACTAACAAAACAAAATTTAGTAAAAGCCAATCCTCTAAAAGATTACGTTGCA
GCTATAAGCGTTGGAAAGGTTAGAAATGAAATAGTCTTAGACCTTAACTATACAGAAGACTCAAATGCACAGGTAGATAT
GAACCTTGTGATGACCGGTAAAGGTGAGTTTGTAGAGATAGGAGCAACCGGTGAAGAAAACACATTTTCTCAAGAAGATT
TTAATAAAATGCTTGAATATGGAAAATCCGGGATAGAAAGACTTATAAAAATTCAAAAAGAATTTATAGAAGGAATTCCA
TCAATTGGACACTGGGAAAGAAAAAATATTAAAGAGTTTGTATACAAAGAGTAA

Protein sequence :
MRPDGRKPAQLRPIKIIRDFNIYAEGSVLIEFGNTKVIVTASVEDKVPPFLKGTGQGWITAEYSMIPRASETRSLREVVR
GSPSGRTHEIQRLIGRSLRAAVDLKKLGEKTIWIDCDVIQADGGTRVASITGAFIAVADACIKLTKQNLVKANPLKDYVA
AISVGKVRNEIVLDLNYTEDSNAQVDMNLVMTGKGEFVEIGATGEENTFSQEDFNKMLEYGKSGIERLIKIQKEFIEGIP
SIGHWERKNIKEFVYKE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
rph YP_001800860.1 ribonuclease PH Not tested Not named Protein 2e-58 55