|
Name : SYO3AOP1_0403 (SYO3AOP1_0403) Accession : YP_001930600.1 Strain : Sulfurihydrogenibium sp. YO3AOP1 Genome accession: NC_010730 Putative virulence/resistance : Virulence Product : KpsF/GutQ family protein Function : - COG functional category : M : Cell wall/membrane/envelope biogenesis COG ID : COG0794 EC number : 5.3.1.13 Position : 419344 - 420291 bp Length : 948 bp Strand : + Note : KEGG: aae:aq_1546 polysialic acid capsule expression protein; TIGRFAM: KpsF/GutQ family protein; PFAM: CBS domain containing protein; sugar isomerase (SIS) DNA sequence : TTGATTTTGGATATTGCAAAAAAAACAATAGATGAGGAGATAAATGCCTTAAACAGACTTAAAGACTCATTAGATGAAAA TTTTGAAAAGGCTGTAAACTTAATTTTAAATTGTAAAGGTAAAGTTGTAATAACAGGAATTGGCAAATCAGGAATCGTAG GCAAAAAAATTTCTTCTACTTTTTCATCAACGGGTACACCTTCGTTTTTCTTGCATCCGGCTGAAGCCATTCATGGCGAC CTTGGGATGGTAGAAAAAGAAGACTTGATTTTAGCCATCTCAAACAGTGGTGAAACTCCGGAATTAATCGCAATCATTCC AATTTTAAAAAGATGGGGAAACAAGATAATCTCTATAACAAATAAAAAAGACTCTACTTTGGCAAAATATTCTGATGTGG TTTTATATTTAAACGTTGACAAAGAAGCCTGTCCGCTGAATTTAGCACCAACTTCAACGTCGACGGCAACGCTTGTTCTT GGTGATGCTTTGGCAGTAGCATTACTTACATTAAGAGGTTTTAAAGAAGAAGATTTTGCAAAATTTCATCCAGGCGGTTC TCTTGGTAAAAAGCTTATGAAAGTTGAGCATATCATGAGAAAAGACCTGCCATTATCTTATACAGATGCACCTTTAAGAG AAGCTATTATTGAAATGTCAGAAAAAGGCTTAGGTGCTGTTTTGATAGTTGATAAAAATAATAATTTAGTGGGAATTATA ACAGATGGCGACCTAAGAAGATTTATAAACAAAGGTGGTAGTATAGACAATTCTTTGGCAAAAGATGTTATGACAAAAAA CCCTAAGGTAGCTGAAAAACATTGGTATGTTCTTCAAGCATTGGAGTTAATGGAAAGATATAACATAACAGTCCTTCCGG TGGTTGAAAACAGTAAGCCAATAGGAATAGTTCATATTCATGATATTTTAAAGAGTGGAGTGATTTAG Protein sequence : MILDIAKKTIDEEINALNRLKDSLDENFEKAVNLILNCKGKVVITGIGKSGIVGKKISSTFSSTGTPSFFLHPAEAIHGD LGMVEKEDLILAISNSGETPELIAIIPILKRWGNKIISITNKKDSTLAKYSDVVLYLNVDKEACPLNLAPTSTSTATLVL GDALAVALLTLRGFKEEDFAKFHPGGSLGKKLMKVEHIMRKDLPLSYTDAPLREAIIEMSEKGLGAVLIVDKNNNLVGII TDGDLRRFINKGGSIDNSLAKDVMTKNPKVAEKHWYVLQALELMERYNITVLPVVENSKPIGIVHIHDILKSGVI |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| kpsF | CAE85210.1 | KpsF protein | Virulence | PAI V 536 | Protein | 2e-42 | 46 |
| kpsF | AAZ04466.1 | polysialic capsule transport protein | Virulence | PAI I APEC-O1 | Protein | 2e-42 | 46 |
| kpsF | YP_854329.1 | polysialic acid capsule synthesis protein KpsF | Not tested | PAI I APEC-O1 | Protein | 3e-42 | 46 |
