Gene Information

Name : SYO3AOP1_0164 (SYO3AOP1_0164)
Accession : YP_001930363.1
Strain : Sulfurihydrogenibium sp. YO3AOP1
Genome accession: NC_010730
Putative virulence/resistance : Virulence
Product : NAD-dependent epimerase/dehydratase
Function : -
COG functional category : M : Cell wall/membrane/envelope biogenesis
COG ID : COG0451
EC number : -
Position : 180040 - 181020 bp
Length : 981 bp
Strand : +
Note : PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; dTDP-4-dehydrorhamnose reductase; Male sterility domain; KEGG: aae:aq_1335 nucleot

DNA sequence :
ATGAAGACAGTATTACTTACAGGTGCAGCAGGTTTTATTGGTTGGAAAACTGCTGAATTTTTATTAAAAGAAGGATATAA
AGTTATTGGCGTAGACAATTTAAACAACTATTACGATGTAAGATTAAAAGAATATAGAAAAAAAGACCTTGAAAAGTATG
AGAATTTTAAATTTTATCCAGTTGATATTGAAAATCTTCAAGCTTTAGAAATTCTTTTTAATGACTACAAATTTGATGTA
GTAATTAACTTAGCAGCAAGGGCTGGCGTAAGATACAGTATGATAAACCCCTATGTTTATATGACAACAAACGCAAATGG
TACATTAAATTTACTTGATTTGATGAAAAAGTACAGTGTTAAAAAGTTTGTTCTTGCTTCTACCTCTTCATTGTATGCCG
GACAGCCAATGCCGTTTAAAGAAGACCTGCCTGTAAATACACCGATATCTCCTTATGCTGCATCAAAAAAAGCTGCAGAA
GTGATGGCATATACTTATCACTATCTTTATGGAATTGATGTATCAGTTGTAAGATATTTTACAGTTTATGGTCCAGCCGG
CAGACCTGATATGAGTATTTTTAGATTTATAAAATGGATTGATGAAGGAAAACCAATTATTTTATACGGTGATGGTTCTC
AATCAAGAGATTTTACATACGTTGATGATATTGCAAGAGGCACTATTTTAGCAACTAAAGAGCTTGGTTATGAGATTATA
AATCTTGGTGGTGGTAAAAATCCTATAAGTTTAAAAAGAGTTATTGAAACCATCGAAGCACATCTTGGTAAAAAGGCTGT
TATTGATTATAGACCTTTTCATAAAGCAGATTTAAAAGAAACTTGGGCTGATATTACAAAAGCTAAAAATCTTCTTGGCT
GGGAGCCAAAGGTAAGCTTTGAAGAGGGTATTAAAAAGACTGTTGATTGGTATTTAGAAAATAGAGATTGGCTTAAAGAT
GTGGAAGTTGGAAATGAGTGA

Protein sequence :
MKTVLLTGAAGFIGWKTAEFLLKEGYKVIGVDNLNNYYDVRLKEYRKKDLEKYENFKFYPVDIENLQALEILFNDYKFDV
VINLAARAGVRYSMINPYVYMTTNANGTLNLLDLMKKYSVKKFVLASTSSLYAGQPMPFKEDLPVNTPISPYAASKKAAE
VMAYTYHYLYGIDVSVVRYFTVYGPAGRPDMSIFRFIKWIDEGKPIILYGDGSQSRDFTYVDDIARGTILATKELGYEII
NLGGGKNPISLKRVIETIEAHLGKKAVIDYRPFHKADLKETWADITKAKNLLGWEPKVSFEEGIKKTVDWYLENRDWLKD
VEVGNE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cap1I AAA64648.1 type 1 capsule synthesis gene Virulence SCCcap1 Protein 5e-50 41