Gene Information

Name : SYO3AOP1_1542 (SYO3AOP1_1542)
Accession : YP_001931694.1
Strain : Sulfurihydrogenibium sp. YO3AOP1
Genome accession: NC_010730
Putative virulence/resistance : Resistance
Product : sodium solute transporter superfamily protein
Function : -
COG functional category : R : General function prediction only
COG ID : COG4147
EC number : -
Position : 1584488 - 1586221 bp
Length : 1734 bp
Strand : +
Note : TIGRFAM: SSS sodium solute transporter superfamily; PFAM: Na+/solute symporter; KEGG: sun:SUN_1147 sodium:solute symporter

DNA sequence :
ATGACTAAAAGGAGTTTAATGTTTTATCTACTAAGTATAGTTGTTGTAGGATTTGCCTTTGCAGCCGGCGGAGTGGAAGG
ACCGGTTCAAAAGCAAGCTGTAAACCCACTTGCAATAACGATGTTTATAATCTTTGTTGCTGCAACGCTTGGAATTACAT
ATTGGGCTGCAAAAAGAACAAAAACAGCTAAGGATTTCTACACAGCAGGCGGTGGAATTACAGGATTTCAAAATGGTTTA
GCAATAGCTGGTGATTACATGTCTGCTGCATCTTTCCTTGGAATTGCTGGACTTGTTTATACATCCGGATATGATGGATT
GCTTTACTCTATTGGTTTCTTGGTTGGTTGGCCTATTGTTATGTTCTTACTTTCTGAGCCACTTAGAAATCTTGGAAAGT
ATACCTTTGCAGACGTAACATCTTTTAGACTTGAACAAAGAAGAATAAGAATTCTTGCTGCAATTGGTTCTCTGTCTGTT
GTAACATTCTATCTTATCGCACAAATGGTTGGTGCTGGTAAGCTTATACAGTTGTTATTTGGTTTACCTTACTCAACGGC
TGTTATAGTTGTTGGTTCATTAATGATAATCTACGTTGCGTTTGGTGGAATGCTTGCAACAACTTGGATTCAGATTATAA
AAGCTATCTTACTACTTGGTGGTGCTTCATTTATGGCGTTTATGGTACTACTTCATTTTGGATTTAGTTTTGAAAATCTC
TTCCAAACAGCCGTGTCTGTTCACTCAAAAGGTGAAAAGATAATGGCTCCCGGTGGTCTTGTTTCTGACCCATTAAACGC
TATCTCTCTTGGACTTGCTTTAATGTTTGGAACAGCTGGATTACCACACATCTTAATGAGATTCTTTACAGTTCCTAACG
CAAAAGAAGCAAGAAAATCAGTATTCTTTGCAACAGGATTTATTGGATACTTCTACATCTTAACGTTCATAATTGGATTT
GGTGCTATTGCTTTATTCATTCAACATCCAGAATACTTCCAAAATGCTAAACAAATCGTTGTTGATGGAATTACTAAAAT
AGTTGATGCTAACGATCCTACTAAAAACTTGATCGGTGATAAAAAGGCTCTTATTGGCGGAGAAAATATGACAGCTATTC
ACTTAGCTGAAGCTGTTGGCGGACCTGCGTTTATGGGATTCATCTCTGCGGTTGCTTTTGCTACAATCCTTGCAGTAGTA
TCCGGTTTAACACTTGCCGGAGCTTCTACTGTATCCCACGACCTTTACGCTAACGTTTTTGCAGAAGAAAAAGATGAACA
AAAAGAAGTTAAAGTTTCCAAAATAGCTACAATTATCATTGGTATCTTTGCAATCGTTCTTGGAATTGTTTTTGAAAAAC
AAAACGTTGCGTTTATGGTTGGTTTAGCTTTTGCAATTGCCGCATCTGTTAACTTCCCAATTCTTATCTTATCTATCTAT
TGGAGAAATTTAACAACAACGGGTGCATTCTGGGGCGGACTTGCCGGCTTAGTTGTAGCTCTTGTTTTAATCGTTATCTC
TCCGACAGTTTGGGTTGATGTACTCAAAAATCCAGAACCAATCATAAAACTCAAAAACCCGGCTATCTTCTCAATGCTAA
CTACTTTTGTATTAACAATACTTATCTCTAAGCTTGACAACAGCCAAAGAGCAAAAGAAGACAGAGAAGGATTTGAACCA
CAATATATTAGAACTCAAACAGGTATAGGCGCAGAAGGTGCTGTACATCATTAA

Protein sequence :
MTKRSLMFYLLSIVVVGFAFAAGGVEGPVQKQAVNPLAITMFIIFVAATLGITYWAAKRTKTAKDFYTAGGGITGFQNGL
AIAGDYMSAASFLGIAGLVYTSGYDGLLYSIGFLVGWPIVMFLLSEPLRNLGKYTFADVTSFRLEQRRIRILAAIGSLSV
VTFYLIAQMVGAGKLIQLLFGLPYSTAVIVVGSLMIIYVAFGGMLATTWIQIIKAILLLGGASFMAFMVLLHFGFSFENL
FQTAVSVHSKGEKIMAPGGLVSDPLNAISLGLALMFGTAGLPHILMRFFTVPNAKEARKSVFFATGFIGYFYILTFIIGF
GAIALFIQHPEYFQNAKQIVVDGITKIVDANDPTKNLIGDKKALIGGENMTAIHLAEAVGGPAFMGFISAVAFATILAVV
SGLTLAGASTVSHDLYANVFAEEKDEQKEVKVSKIATIIIGIFAIVLGIVFEKQNVAFMVGLAFAIAASVNFPILILSIY
WRNLTTTGAFWGGLAGLVVALVLIVISPTVWVDVLKNPEPIIKLKNPAIFSMLTTFVLTILISKLDNSQRAKEDREGFEP
QYIRTQTGIGAEGAVHH

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAK01502.1 putative amino acid transport protein Not tested PAGI-1 Protein 4e-128 55
cur_1523 YP_001800917.1 transporter Not tested Not named Protein 2e-72 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SYO3AOP1_1542 YP_001931694.1 sodium solute transporter superfamily protein BAC0564 Protein 2e-147 64
SYO3AOP1_1542 YP_001931694.1 sodium solute transporter superfamily protein BAC0570 Protein 3e-141 61