Gene Information

Name : SYO3AOP1_1498 (SYO3AOP1_1498)
Accession : YP_001931654.1
Strain : Sulfurihydrogenibium sp. YO3AOP1
Genome accession: NC_010730
Putative virulence/resistance : Virulence
Product : nucleotide sugar dehydrogenase
Function : -
COG functional category : M : Cell wall/membrane/envelope biogenesis
COG ID : COG1004
EC number : 1.1.1.22
Position : 1542985 - 1544154 bp
Length : 1170 bp
Strand : -
Note : KEGG: tme:Tmel_1067 UDP-glucose 6-dehydrogenase; TIGRFAM: nucleotide sugar dehydrogenase; PFAM: UDP-glucose/GDP-mannose dehydrogenase; NAD-dependent glycerol-3-phosphate dehydrogenase domain protein; UDP-glucose/GDP-mannose dehydrogenase dimerisation; UDP

DNA sequence : 
ATGAAAATAGCCGTTGCAGGTGCTGGTTATGTTGGATTATCTAATGCTATCTTGCTTGCCCAAAACCATCAAGTTGTAAT
TAAAGACATAGACCCTCAAAAAGTCAAGCTGATCAATGAAAAAAAATCTCCAATTATAGATAAAGATATTCAAGAATACT
TAGCAACTAAAAATTTAAACATAAAGGCTACCTTAGACCCGCAGGAAGCTTACAAAGATGCAAAGTATGTAATAATCGCA
ACTCCTACAGATTATGATCCTATTACAAACTACTTTAATACAAAATCAGTAGAATCTGTCATAAAAGAAGTTTTAACAGT
AAATCCTGATGCTGTAATGGTCATTAAATCTACTATTCCTATTGGATACACAGAAAGCATAAAGAAAAAATTTAATACAG
AAAATATTATTTTTTCTCCTGAGTTTTTAAGAGAAGGTAAAGCTTTATACGATAATCTCTATCCTTCAAGGGTTGTAGTT
GGTGAAAAAAGTGAGAGGGCAAAGGAGTTTGCAAATCTGTTGTTAGAAGGTGCTATAAAAAAAGATGTTCCGGTTTTATT
TACAGGCTCTACTGAAGCAGAAAGTATAAAGCTTTTTGCAAATACATATTTAGCCATGAGAGTTGCATTTTTTAATGAGC
TTGATACTTTTGCTGAAAGCCATGGATTAAATTCTAAAGAAATTATTGAAGGGGTATGTTTAGACCCAAGAATAGGCATG
CATTATAATAATCCATCTTTTGGATTTGGAGGCTACTGCTTGCCAAAAGATACAAAACAATTAATGGCTAACTACTTAGA
AAAAGGAATACCACACTTTTTAATCAAGGCTACAGTTGAATCAAACATTGCAAGGAAATACTATATAGCAGAAAAGATTA
TAAGCTTAAACCCAAAAATCGTTGGCGTTTATAGACTTACAATGAAATCGGATTCAGATAATTTTAGAGAAGCTGCAATT
ATAGATATAATTGAGTATTTAAGGGCAAAAGATGTTCAAGTTATAATTTTCGAACCTTTACTAAAAGAAAGTAAGTTTAT
GGATTTTGATGTTGTATCCTTAGAGAGATTAAAAAAAGAATCTGACATTATCCTTGCTAACAGATATAGCTCTGATTTAG
ATGATGTGAGAGAAAAGGTTTACACAAGAGATGTTTTTTATAGGGATTAG

Protein sequence : 
MKIAVAGAGYVGLSNAILLAQNHQVVIKDIDPQKVKLINEKKSPIIDKDIQEYLATKNLNIKATLDPQEAYKDAKYVIIA
TPTDYDPITNYFNTKSVESVIKEVLTVNPDAVMVIKSTIPIGYTESIKKKFNTENIIFSPEFLREGKALYDNLYPSRVVV
GEKSERAKEFANLLLEGAIKKDVPVLFTGSTEAESIKLFANTYLAMRVAFFNELDTFAESHGLNSKEIIEGVCLDPRIGM
HYNNPSFGFGGYCLPKDTKQLMANYLEKGIPHFLIKATVESNIARKYYIAEKIISLNPKIVGVYRLTMKSDSDNFREAAI
IDIIEYLRAKDVQVIIFEPLLKESKFMDFDVVSLERLKKESDIILANRYSSDLDDVREKVYTRDVFYRD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SSP0068 YP_300158.1 UDP-glucose 6-dehydrogenase Not tested SCC15305cap Protein 3e-88 59

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SYO3AOP1_1498 YP_001931654.1 nucleotide sugar dehydrogenase VFG0963 Protein 2e-103 59