Gene Information

Name : SYO3AOP1_1480 (SYO3AOP1_1480)
Accession : YP_001931636.1
Strain : Sulfurihydrogenibium sp. YO3AOP1
Genome accession: NC_010730
Putative virulence/resistance : Resistance
Product : winged helix family two component transcriptional regulator
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 1527092 - 1527751 bp
Length : 660 bp
Strand : -
Note : PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: fnu:FN0585 two-component response regulator CzcR

DNA sequence : 
ATGAAGATACTTTTAGTTGAAGATAATTTAGATTTAAATAATACAATTAGAGAGGTTTTAGAATTAAACGGTTATGTAGT
AGATTCAGCTTTTGACGGAAAAGAAGCTTTAAATTTTATAGAGAATTCAAGTTATGATGTAATTATATTAGATTTAATGC
TTCCGGATATTGATGGATTAGAAGTATTAAAAACTATTAGAAATAAAGGAATAGATACGCCAGTTATAATTCTTACTGCA
AAAAACCAAACAAAAGATAAAATAACAGGACTTGATTTAGGAGCAGATGATTATATTACAAAACCTTTCGATGTTGATGA
ACTTCTTGCAAGAATAAGAGCCATTGGAAGAAGAGTGTCTGCTGAAAAAAAGGATATAGTTTTAATAGATAATTTAGAAA
TAGATTTAAAAAACAAAGTTGTTAAAAAATCTGGAAAATTCGTAGAACTAACTCCAAAGCTTTATTGTATTTTAGAGCAA
TTAGTAAGGAATAGAGGGAAAATTGTAAGTTATGAAACTCTATTAAGTAAATGCTGGGAAATAACGGAAGTACCTTCAAG
AGAGACAATGAGAGCAAATATAAAAAATTTAAGAAAATTGATAGACCCAGACAAGAAAATTATAAAGACAATAGAAGGTG
TTGGATATAGAATTGAATAA

Protein sequence : 
MKILLVEDNLDLNNTIREVLELNGYVVDSAFDGKEALNFIENSSYDVIILDLMLPDIDGLEVLKTIRNKGIDTPVIILTA
KNQTKDKITGLDLGADDYITKPFDVDELLARIRAIGRRVSAEKKDIVLIDNLEIDLKNKVVKKSGKFVELTPKLYCILEQ
LVRNRGKIVSYETLLSKCWEITEVPSRETMRANIKNLRKLIDPDKKIIKTIEGVGYRIE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
vanRB YP_008394254.1 DNA-binding response regulator VanRB Not tested Not named Protein 5e-28 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SYO3AOP1_1480 YP_001931636.1 winged helix family two component transcriptional regulator NC_007793.3914065.p0 Protein 6e-31 42
SYO3AOP1_1480 YP_001931636.1 winged helix family two component transcriptional regulator NC_002758.1121390.p0 Protein 6e-31 42
SYO3AOP1_1480 YP_001931636.1 winged helix family two component transcriptional regulator NC_010079.5776364.p0 Protein 6e-31 42
SYO3AOP1_1480 YP_001931636.1 winged helix family two component transcriptional regulator NC_002952.2859858.p0 Protein 6e-31 42
SYO3AOP1_1480 YP_001931636.1 winged helix family two component transcriptional regulator NC_007622.3794948.p0 Protein 6e-31 42
SYO3AOP1_1480 YP_001931636.1 winged helix family two component transcriptional regulator NC_003923.1003417.p0 Protein 6e-31 42
SYO3AOP1_1480 YP_001931636.1 winged helix family two component transcriptional regulator NC_013450.8614146.p0 Protein 6e-31 42
SYO3AOP1_1480 YP_001931636.1 winged helix family two component transcriptional regulator AE015929.1.gene1106. Protein 8e-26 42
SYO3AOP1_1480 YP_001931636.1 winged helix family two component transcriptional regulator NC_002951.3238224.p0 Protein 6e-31 42
SYO3AOP1_1480 YP_001931636.1 winged helix family two component transcriptional regulator AF310956.2.orf0.gene Protein 2e-28 41
SYO3AOP1_1480 YP_001931636.1 winged helix family two component transcriptional regulator DQ212986.1.gene4.p01 Protein 1e-26 41
SYO3AOP1_1480 YP_001931636.1 winged helix family two component transcriptional regulator BAC0487 Protein 8e-29 41