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Name : SYO3AOP1_1195 (SYO3AOP1_1195) Accession : YP_001931360.1 Strain : Sulfurihydrogenibium sp. YO3AOP1 Genome accession: NC_010730 Putative virulence/resistance : Unknown Product : seryl-tRNA synthetase Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG0172 EC number : 6.1.1.11 Position : 1244275 - 1245528 bp Length : 1254 bp Strand : + Note : catalyzes a two-step reaction, first charging a serine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA DNA sequence : ATGATTGATATAAAACTTCTTAGAGAAAATCCTGATTTTGTAAAAGAAAGATTAAAAACAAGAGATGAAAGTTATCTAAA ACTTATAGATAGACTTTTAGAAATAGATGAAGAAAGGAGAAAAATAATAAAAGAAATAGAAAGTTTAAGAGCTGAAAGAA ATGAAAAATCTAAGCTTTTTCCGATCTTAAAGAAGGAAGGTAAAGACACAACAGAAATACAGCAAAGAGTAAAACAGATT GGAGAGATAATAAAGAATTTAGAAGATAAACTTCAAGAAATTGAAAATGAGTTTAATAATATCCTTTACTACATTCCAAA CTTACCTGCACCTGATGTTCCTATTGGAAAAGACGAAAATGATAATGTTGAAATAAGAAGATGGGGAAAGCCAAGAAAGT TTGATTTTGAGCCGTTATCTCATTATGAGATTGGAGAAAGGCTTGGTATTTTAGATTTTGAAAGGGGAGCTAAGCTTTCA GGTTCAAGATTTACAGTAATGTTTAAAGAAGCTGCAAGATTAGAAAGAGCTTTAATAAACTTTATGCTTGATGTTCACAC AAAACAGCATGGATATACAGAAGTATGGACTCCTGCATTGGTAAAACCGGAAATCTTATTTGGAACAGGACAACTTCCAA AATTTAAAGATGATTTATACAAAATAGAAGATGAAGATTTATATCTAATACCAACAGCAGAGGTTACATTGACAAATCTT CATGCAGATGAAATACTAAACGAAGAAGATTTACCAAAGTATTACACAGCATATACTCCATGTTTTAGAAAAGAAGCAGG TTCTCATGGAAAAGATGTAAAAGGAATTCTCAGACAGCATCAGTTTGATAAAGTTGAGCTTGTGAAAATCGTTAAGCCCG AGGACTCTTATAATGAGCTTGAAAAACTTGTAAATGAAGCAGAAAAAATTCTCCAACTGTTAGAAATACCTTACAGGGTT GTTTTATTATGCACGGGAGACATGGGTTTTTCTGCTGCAAAGACCTATGATATTGAAGTTTGGATACCATCTCAAAATAG ATACAGAGAGATATCTTCCTGTTCCAACACAGAAGATTTTCAAGCAAGAAGGGCTAAGATTAGGTACAAAGATAAAGACG GAAAAAATCACTATGTACATACATTAAACGGTTCAGGTTTAGCAGTCGGAAGAACGTTAATAGCCATAATGGAAAACTAC CAAAAACCTGACGGAACCTTTGAAATTCCGAAAGTTTTGAAGGATTACTTATAA Protein sequence : MIDIKLLRENPDFVKERLKTRDESYLKLIDRLLEIDEERRKIIKEIESLRAERNEKSKLFPILKKEGKDTTEIQQRVKQI GEIIKNLEDKLQEIENEFNNILYYIPNLPAPDVPIGKDENDNVEIRRWGKPRKFDFEPLSHYEIGERLGILDFERGAKLS GSRFTVMFKEAARLERALINFMLDVHTKQHGYTEVWTPALVKPEILFGTGQLPKFKDDLYKIEDEDLYLIPTAEVTLTNL HADEILNEEDLPKYYTAYTPCFRKEAGSHGKDVKGILRQHQFDKVELVKIVKPEDSYNELEKLVNEAEKILQLLEIPYRV VLLCTGDMGFSAAKTYDIEVWIPSQNRYREISSCSNTEDFQARRAKIRYKDKDGKNHYVHTLNGSGLAVGRTLIAIMENY QKPDGTFEIPKVLKDYL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| serS | YP_003446791.1 | seryl-tRNA synthetase | Not tested | The aminoglycoside resistance gene cluster | Protein | 5e-99 | 58 |
