Gene Information

Name : SYO3AOP1_1179 (SYO3AOP1_1179)
Accession : YP_001931345.1
Strain : Sulfurihydrogenibium sp. YO3AOP1
Genome accession: NC_010730
Putative virulence/resistance : Virulence
Product : 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein
Function : -
COG functional category : C : Energy production and conversion
COG ID : COG0437
EC number : -
Position : 1228005 - 1228640 bp
Length : 636 bp
Strand : +
Note : PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: nis:NIS_0571 4Fe-4S ferredoxin

DNA sequence : 
ATGAGACTTGGATTTTTAGTTGATTTAAGCAGATGTATGGGATGCATGGCGTGTGCGGTCTCTTGTAAAGCTGAAAATGA
TGTTCCACTTCACAGCTGGAGACTAAGAGTTAAATACATTGACCAAGGCGAATTTCCTTATGTAAAAAGACATTTCGTAC
CTCTAAGATGTAATCACTGCGAAAACGCTCCATGTGAAAGAATCTGCCCTGTTAGTGCTTTACACTATTTACCAAACGGT
ATAGTTAACGTAGACCATAACAGATGTATCGGTTGTGCTTCTTGTATGATGGCATGTCCTTACAACGCTATATATATAGA
TCCAATAACAAACTCAGCTGATAAATGTACATACTGCGCCCATAGAATAGAAGTTGGCATGATGCCTGCTTGCGTAGTTG
CATGTCCAACTCATGCAAATATCTTTGGAGACCTTGACGACCCAGAAAGTGAAATCTCTAAGTACCTAAAAGAACACAGA
GATGTAATGGTAAGAAAGCCGGAGTTAAACACAAAACCAAAACATTTCTACGTTAGAGGTTCAACTGTTGCACTTGACCC
ATTAGCTTCTGAAAGACCTGAAGGGTACACTTTATTTACAGAAGTTAAATTCTTAGACCATATAGGAGGGCATTAA

Protein sequence : 
MRLGFLVDLSRCMGCMACAVSCKAENDVPLHSWRLRVKYIDQGEFPYVKRHFVPLRCNHCENAPCERICPVSALHYLPNG
IVNVDHNRCIGCASCMMACPYNAIYIDPITNSADKCTYCAHRIEVGMMPACVVACPTHANIFGDLDDPESEISKYLKEHR
DVMVRKPELNTKPKHFYVRGSTVALDPLASERPEGYTLFTEVKFLDHIGGH

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ttrB YP_216393.1 tetrathionate reductase complex subunit B Virulence SPI-2 Protein 2e-36 45
ttrB NP_805056.2 tetrathionate reductase subunit B Virulence SPI-2 Protein 2e-36 45
ttrB CAB37414.1 tetrathionate reductase subunit B (TtrB) Virulence SPI-2 Protein 3e-36 45
ttrB NP_456142.1 tetrathionate reductase subunit B Virulence SPI-2 Protein 4e-36 45
ttrB NP_460350.1 tetrathionate reductase complex subunit B Virulence SPI-2 Protein 4e-36 45

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SYO3AOP1_1179 YP_001931345.1 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein VFG0486 Protein 1e-36 45