Gene Information

Name : SYO3AOP1_1073 (SYO3AOP1_1073)
Accession : YP_001931244.1
Strain : Sulfurihydrogenibium sp. YO3AOP1
Genome accession: NC_010730
Putative virulence/resistance : Virulence
Product : glutamine synthetase, type I
Function : -
COG functional category : E : Amino acid transport and metabolism
COG ID : COG0174
EC number : -
Position : 1113612 - 1115039 bp
Length : 1428 bp
Strand : -
Note : TIGRFAM: glutamine synthetase, type I; PFAM: glutamine synthetase catalytic region; glutamine synthetase beta-Grasp; KEGG: aae:aq_111 glutamine synthetase

DNA sequence :
ATGGCAATGATTCAATGTCAAACACCAGATGATGTGATGCGTGTAATTTCAGAAAAAGGTATTGCCTTTATTGATTTTAA
GTTTTCAGACCCATTTGGTCAGTGGCAACATTTAACAATCCCAACTCATGAGTTTGGTCTCCATTCATTTGAAAACGGAA
TTCCGTTTGATGGTTCATCAATAAGAGGTTGGAAAGGTATTCAAGAATCAGATATGTTATTAATTCCAGACCCAAAAACA
GCATTCATCGACCCATTCATAGAAGAACCAACTTTATCTTTAATCTGCGATGTTGTTGACCCAATAACTAAAGAGCCATA
CTCAAGAGACACAAGACAAATTGCTAAAAAAGCTCTTGAATTTTTGAGATCTTCAGGTATTGGTGATATAGCCTACTTTG
GTCCAGAAGCAGAATTCTTTATTTTTGATGATATTAGATTCAGCTCAGGACCTAACCATGCTTACTACCAAGTAGATTCT
GAAGAAGCATGGTGGAATACTGCAAGAGAAGAAAACCCAAATCTTGGATATAAAATACCTTATAAAAGAGGATACTTCCC
AGTTTCTCCATTGGACAAAACTCATCATATAAGAATGGATATGGTTAAAACACTTGAAGAAGTAGGTATTACAGTAGAAA
GAGAACACCATGAAGTAGCAACAGCAGGACAAGGAGAAATCAACTTCAGATTTTCAGATATCATTGGTTCAGGTGATAAC
ATATTAAAATACAAATATGTACTTAGAAACGTTGGATACAGATATGGAAAATTCGTAACATTTATGCCAAAACCATTAGC
AGGCGATAATGGTAGCGGTATGCACTGCCACTTCTCAATCTGGAACAACGGACAAAACCTGTTTGCTGGTAATGGATACG
GTGGATTATCAGAAATAGCTCTCTATGCTATTGGTGGAATCATTAAACATGCAAAAGCTATTTGTGCATTCTCTAACCCA
ACTACAAACTCTTACCATAGATTAGTACCTGGATTTGAAGCTCCTGTAAGACTTGCATACTCTGCAAGAAACAGGTCTGC
TGCGATCAGAATTCCTGTTGGTGAAGCATCTCCAAAGGCTAAAAGAATTGAAGTAAGATTCCCGGATGCATCTTCTAACC
CATACTTAACGTTTACAGCTTTATTGATGGCTGCTATTGATGGTATTGAAAATAAAATCCATCCAGGCGAACCTCTTGAT
AAAGATATCTACTCATTACCACCAGAAGAGCTTGCAAACGTTCCACAAACTCCAGGATCTCTCCAAGAAGCTATCGATGC
ATTAAAAGAAGACAACGAGTTTTTACTCAAAGGTGGCGTAATGGATAAAGACTTTATCAATATGTGGATTGAAACAAAAC
AAGCAGAGCAAGATGCAATCAGATTAGTTCCACATCCAAAAGAATTTGAACTTTACTTTGACGTTTAA

Protein sequence :
MAMIQCQTPDDVMRVISEKGIAFIDFKFSDPFGQWQHLTIPTHEFGLHSFENGIPFDGSSIRGWKGIQESDMLLIPDPKT
AFIDPFIEEPTLSLICDVVDPITKEPYSRDTRQIAKKALEFLRSSGIGDIAYFGPEAEFFIFDDIRFSSGPNHAYYQVDS
EEAWWNTAREENPNLGYKIPYKRGYFPVSPLDKTHHIRMDMVKTLEEVGITVEREHHEVATAGQGEINFRFSDIIGSGDN
ILKYKYVLRNVGYRYGKFVTFMPKPLAGDNGSGMHCHFSIWNNGQNLFAGNGYGGLSEIALYAIGGIIKHAKAICAFSNP
TTNSYHRLVPGFEAPVRLAYSARNRSAAIRIPVGEASPKAKRIEVRFPDASSNPYLTFTALLMAAIDGIENKIHPGEPLD
KDIYSLPPEELANVPQTPGSLQEAIDALKEDNEFLLKGGVMDKDFINMWIETKQAEQDAIRLVPHPKEFELYFDV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
glnA YP_003728749.1 glutamine synthetase Not tested cag PAI Protein 1e-91 48

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SYO3AOP1_1073 YP_001931244.1 glutamine synthetase, type I VFG1399 Protein 3e-115 52