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Name : PGN_0160 (PGN_0160) Accession : YP_001928276.1 Strain : Porphyromonas gingivalis ATCC 33277 Genome accession: NC_010729 Putative virulence/resistance : Unknown Product : thiamine biosynthesis protein ThiC Function : - COG functional category : H : Coenzyme transport and metabolism COG ID : COG0422 EC number : - Position : 174260 - 176023 bp Length : 1764 bp Strand : - Note : required for the synthesis of the hydromethylpyrimidine moiety of thiamine DNA sequence : ATGAAAGAATTCAAAGTGACTACCGGCCCTCTGCCCGGCAGTGAGAAAATCTATGTCGAAGGAGAGCGTTTTCCCTTCCT GCGTGTACCGATGCGGCGCATCCGAATGTCCGATACCATATTGGAGAACGGCGAACGTGAGAAAAACGAAGATGTAGTCG TATACGATACCAGCGGCCCCTATACCGATACCTCCTATGAGGTGAATCTGCACCGAGGCGTACCGAAGATACGCGAGCAG TGGATAGAGGATCGGGGCGATACGCTGCGGCTCGAAGGGCTCAGCTCCGAATACGGACGGATGAGGCAGTCGGACGCTTC GCTCGAAGAGCTGCGCTACGAGCATGTATGCACACGTCCCCGTGCCGCCAAGGACGGCTGTGCCACGCAGCTCTACTACG CCCGTCAGGGGATCGTGACGCCGGAGATGGAGTTCGTGGCCATCCGCGAAAATCAGTTGATCGATCAGGTCAGGACGCGC TATCGCGCCGAGGAGGGTGAGCCGCTCGGAGCTGTTATCCCGCGCAAGATCACACCCGAATTTGTACGCGACGAGATTGC CGCCGGACGGGCTATCCTTCCGGCCAATATCAATCATCCGGAGAGTGAGCCGATGATCATTGGGCGTAATTTCCTCGTCA AGATCAATGCGAACATAGGCAATTCGCCCATCAGCAGTACCATCGAGGAGGAGGTGGAAAAGGCCGTCTGGGCCATACGC TGGGGTGCCGATACGGTCATGGATCTCTCCACGGGGGATCATATCCATGAGACGCGCGAGTGGATCATCCGCAATTCACC CGTGCCCATCGGCACCGTACCTCTCTACCAGACGCTGGAGAAGGTGCAGGGCGATGTGACGAAGCTCAACTGGGAGATAT TCCGCGATACGCTCATCGAGCAGGCTGAGCAGGGTGTGGACTACTTCACCATCCACGCCGGTCTGCGTTGGCACCACGTG CCTCTGACCTTGCGCCGTCTCACGGGGATCGTCTCCCGCGGTGGTTCCATCATCGCCAACTGGTGCACCACCCACAAGCG CGAAAGTTTCATCTACGAGCATTTCGAAGAGATCTGCCGGATCCTCGCACACTACGACGTAGCCATATCCCTCGGCGATG GCTTGCGCCCGGGCTGCATCCACGATGCCAACGATGCTGCGCAGATAGCTGAGCTGAAGACACTGGGCGAACTTACCGAG ATCGCTTGGAAGTACAACGTGCAAACCATTATCGAAGGCCCGGGACACGTGCCCATGCACAAGATCCGCGAGAATATGGA GATTCAGCTCGAAGCCTGCCATGGCGCACCCTTCTACACCCTCGGCCCGTTGGTCAGCGACGTGGCGTCCGGCTACGACC ATATCACATCGGCCATCGGCGCGGCACAGATCGGATGGTTCGGCACAGCCATGCTCTGCTATGTGACGCAAAAGGAGCAT TTGGGTCTGCCCAACCGCGAAGATGTACGTGAAGGTGTAGTAACCTATAAACTGGCTGCTCATGCCGCCGACTTGGCCAA AGGACACCCCACGGCGTACTGGCGCGACTATATGATGAGCAAGGCGCGGTTCGAATTCCGCTGGAAGGATCAGTTCCATC TCTCGCTTGATCCGGAGAAAGCGATCCAATTCCACGATGCCACGCTGCCGGACGAAGGCCACAAAGAGGCGCATTTCTGC TCCATGTGCGGCGAACACTTCTGCTCCATGCGTGCCAATAAGAACTTCCGCAAGTTGCTAAACGAAGAGGCAGTCTCCAA ATGA Protein sequence : MKEFKVTTGPLPGSEKIYVEGERFPFLRVPMRRIRMSDTILENGEREKNEDVVVYDTSGPYTDTSYEVNLHRGVPKIREQ WIEDRGDTLRLEGLSSEYGRMRQSDASLEELRYEHVCTRPRAAKDGCATQLYYARQGIVTPEMEFVAIRENQLIDQVRTR YRAEEGEPLGAVIPRKITPEFVRDEIAAGRAILPANINHPESEPMIIGRNFLVKINANIGNSPISSTIEEEVEKAVWAIR WGADTVMDLSTGDHIHETREWIIRNSPVPIGTVPLYQTLEKVQGDVTKLNWEIFRDTLIEQAEQGVDYFTIHAGLRWHHV PLTLRRLTGIVSRGGSIIANWCTTHKRESFIYEHFEEICRILAHYDVAISLGDGLRPGCIHDANDAAQIAELKTLGELTE IAWKYNVQTIIEGPGHVPMHKIRENMEIQLEACHGAPFYTLGPLVSDVASGYDHITSAIGAAQIGWFGTAMLCYVTQKEH LGLPNREDVREGVVTYKLAAHAADLAKGHPTAYWRDYMMSKARFEFRWKDQFHLSLDPEKAIQFHDATLPDEGHKEAHFC SMCGEHFCSMRANKNFRKLLNEEAVSK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| BJAB07104_00317 | YP_008207782.1 | Thiamine biosynthesis protein ThiC | Not tested | AbaR25 | Protein | 0.0 | 65 |
| BJAB0868_00321 | YP_008211647.1 | Thiamine biosynthesis protein ThiC | Not tested | AbaR26 | Protein | 0.0 | 65 |
| thiC | YP_001598318.1 | thiamine biosynthesis protein ThiC | Not tested | MDA | Protein | 2e-180 | 64 |
