Gene Information

Name : Mpop_0498 (Mpop_0498)
Accession : YP_001923211.1
Strain : Methylobacterium populi BJ001
Genome accession: NC_010725
Putative virulence/resistance : Virulence
Product : flagellar biosynthetic protein FliP
Function : -
COG functional category : N : Cell motility
COG ID : COG1338
EC number : 3.1.1.3
Position : 530563 - 531324 bp
Length : 762 bp
Strand : +
Note : KEGG: mex:Mext_0427 flagellar biosynthetic protein FliP; TIGRFAM: flagellar biosynthetic protein FliP; PFAM: type III secretion system inner membrane P protein

DNA sequence :
ATGATCCCCTCCCCCCGCCGACCCGTGCTGCGCTCCCTCCCCCTCACCGCGCTCCTCGTTGCCCTGCTGCTCGCGGGCGG
CTCGGGCGCGGCGCTGGCGCAGAGCGTCACCCTCGATCTCGGCGCGGGCGGCACCACCGAGCGGGCGCTTCAGCTCGTCG
CGCTGATCACGGTCCTGGCGCTCGCGCCCTCCGTGCTGGTGATGGCGACCTCCTTCACCCGGATCGTCGTGGTTCTGTCG
ATCCTGCGCTCGGCGCTCGGCACGCAGACCGCGCCGCCCAATACCGTGATGGTCAGCCTCGCCCTGTTCCTGACCGCCTT
CGTGATGGCGCCGACGGCGCGCGAGGCCTATCGGGCCGGCGTCGAGCCGCTGGTGGCGGGCCAGATCAGCCAGTCGCAGG
CGTTCGAGCGGGCCTCGGCGCCGTTCAAGACCTTCATGCTGCGCAACGTGCGCGAGAAGGACCTCAAGCTGTTCCTCGAC
ATGGCGCGCCAGCCCGCTCCGGCAGGCCCCGAGGCGATCGGCCTGGAGATCGTCACCCCCGCCTTCATGATCTCGGAATT
GCGGCGCGCCTTCGAAATCGGCTTCCTCCTGTTCATCCCCTTCCTGATCATCGACCTCGTCGTCGCCTCGGTGCTGATGG
CGATGGGCATGATGATGCTGCCGCCAGCCACCGTGGCGCTGCCGTTCAAGCTGATCTTCTTCGTGCTCGTCGATGGCTGG
ACGCTGGTGGCAGGCTCGCTGATTCAGAGCTACGGAGGCTGA

Protein sequence :
MIPSPRRPVLRSLPLTALLVALLLAGGSGAALAQSVTLDLGAGGTTERALQLVALITVLALAPSVLVMATSFTRIVVVLS
ILRSALGTQTAPPNTVMVSLALFLTAFVMAPTAREAYRAGVEPLVAGQISQSQAFERASAPFKTFMLRNVREKDLKLFLD
MARQPAPAGPEAIGLEIVTPAFMISELRRAFEIGFLLFIPFLIIDLVVASVLMAMGMMMLPPATVALPFKLIFFVLVDGW
TLVAGSLIQSYGG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
lscR AAO18040.1 LscR Virulence TTSS locus Protein 2e-18 45
hrcR BAB07862.1 HrcR Virulence Hrp PAI Protein 9e-19 42
hrcR AAP34349.1 HrcR Virulence Hrp PAI Protein 1e-19 42
YPO0270 YP_002345352.1 type III secretion system protein Virulence Not named Protein 6e-19 42
XC_3016 YP_244084.1 type III secretion system protein Virulence Hrp PAI Protein 2e-19 41
hrcR NP_636600.1 type III secretion system protein Virulence Hrp PAI Protein 2e-19 41
hrcR NP_640757.1 type III secretion system protein Virulence Hrp PAI Protein 7e-20 41
hrcR YP_362153.1 type III secretion system protein Virulence Hrp PAI Protein 7e-20 41
hrcR AAD21321.1 HrcR Virulence Hrp PAI Protein 5e-20 41
hrcR YP_198720.1 type III secretion system protein Virulence Hrp PAI Protein 4e-19 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Mpop_0498 YP_001923211.1 flagellar biosynthetic protein FliP VFG2338 Protein 9e-34 54
Mpop_0498 YP_001923211.1 flagellar biosynthetic protein FliP VFG2494 Protein 3e-37 54
Mpop_0498 YP_001923211.1 flagellar biosynthetic protein FliP VFG1259 Protein 8e-33 52
Mpop_0498 YP_001923211.1 flagellar biosynthetic protein FliP VFG0394 Protein 3e-20 46
Mpop_0498 YP_001923211.1 flagellar biosynthetic protein FliP VFG2016 Protein 6e-27 46
Mpop_0498 YP_001923211.1 flagellar biosynthetic protein FliP VFG0188 Protein 4e-21 44
Mpop_0498 YP_001923211.1 flagellar biosynthetic protein FliP VFG0044 Protein 5e-17 43