|
Name : Mpop_4753 (Mpop_4753) Accession : YP_001927384.1 Strain : Methylobacterium populi BJ001 Genome accession: NC_010725 Putative virulence/resistance : Unknown Product : seryl-tRNA synthetase Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG0172 EC number : 6.1.1.11 Position : 5077744 - 5079030 bp Length : 1287 bp Strand : - Note : catalyzes a two-step reaction, first charging a serine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA DNA sequence : ATGCACGACATCCGCGCCATCCGCGAGAATCCGGAGGCCTTCGACCGCGACCTCGAACGCCGCGGCCTCTCGCCGCTCAG CGCCGAGCTGATCGCCCTCGACGATGCGCGCAAGGGCGCGGTCTCGGCGGCGCAGGCAGCGCAGGAGCGGCGCAACGCCC TGTCGAAGGAGATCGGAGCCGCCAAGAAGGCGAAGGACGAGGCCCGCGCCGCCGAGCTGATGGCCGAGGTCGCCCGCCTC AAGGAAGAGGCGCCAGGGCTGGACGCGGCGCAGGCGCAGGCGGCCAAGGTCCTCGACGAGCGCCTCGCTGCGATCCCGAA TCAGCCGAAGGCCGACGTCCCCCTCGGCGCCGACGAGCACGGCAATGTCGAGTACCGCCGCTTCGATTCCTCCCGCGCGC GCCTTGCGGAAGGCCGCCAGCATTTCGAGCTGGGCGAGGCCACTGGCCTGATGGATTTCGAGGCCGCCGCGAAACTCTCC GGCTCGCGCTTCGTGGTGTTGAAGGGTCCGCTCGCCCGGCTGGAGCGGGCGCTCGGCCAGTTCATGCTCGACCTGCACAC GGGCGAGCATGGGTATACGGAAGTGGTGCCGCCGGTCCTCGTGCGCGACGAGGCGATGTTCGGCACGGCACAATTGCCGA AGTTCCGCGACGATCAGTTCGCGGCGGGCGACGGCTTCTGGCTGATCCCGACGGCCGAAGTGCCGCTCACCAACCTCGTG CGCGAAAACATCCTGGCCGAGGACGAGCTTCCCCTGCGCTTCACCGCGCTCACCCCCTGCTTCCGCGCCGAGGCCGGGGC GGCGGGGCGCGACACCCGCGGCATGCTGCGCCAGCACCAGTTCAACAAGGTCGAGCTCGTCTCGATCACCGCGCCGGAAA AATCCGCGGAAGAGCACGAGCGGATGCTCGCCTGCGCCGAGGCCGTGCTGCAAAAGCTCGACCTGACCTACCGCGTCATG ACGCTCTGCACCGGCGACATGGGCTTTGCCTCCCAGAAGACCTACGACATCGAGGTCTGGGTGCCGGGCCAGCAGACCTA TCGCGAGATCTCGTCCTGCTCGGTCTGCGGTGAGTTCCAGGCGCGGCGGATGAATGCGCGCTACCGGGCCAAGGAGGGCA GAGGGGTCGGCTTCGTCCACACCCTCAACGGCTCGGGCGTCGCGGTCGGCCGCGCCCTGATCGCCGTGATGGAAAACTAC CAGAACCCCGACGGCAGCGTCACGATTCCGTCGGTGCTCCAGCCCTACATGGGCGGCCTGAACCGGATCGAGGGACCGAA CACCTGA Protein sequence : MHDIRAIRENPEAFDRDLERRGLSPLSAELIALDDARKGAVSAAQAAQERRNALSKEIGAAKKAKDEARAAELMAEVARL KEEAPGLDAAQAQAAKVLDERLAAIPNQPKADVPLGADEHGNVEYRRFDSSRARLAEGRQHFELGEATGLMDFEAAAKLS GSRFVVLKGPLARLERALGQFMLDLHTGEHGYTEVVPPVLVRDEAMFGTAQLPKFRDDQFAAGDGFWLIPTAEVPLTNLV RENILAEDELPLRFTALTPCFRAEAGAAGRDTRGMLRQHQFNKVELVSITAPEKSAEEHERMLACAEAVLQKLDLTYRVM TLCTGDMGFASQKTYDIEVWVPGQQTYREISSCSVCGEFQARRMNARYRAKEGRGVGFVHTLNGSGVAVGRALIAVMENY QNPDGSVTIPSVLQPYMGGLNRIEGPNT |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| serS | YP_003446791.1 | seryl-tRNA synthetase | Not tested | The aminoglycoside resistance gene cluster | Protein | 3e-92 | 51 |
