Gene Information

Name : rph (Mpop_0469)
Accession : YP_001923182.1
Strain : Methylobacterium populi BJ001
Genome accession: NC_010725
Putative virulence/resistance : Unknown
Product : ribonuclease PH
Function : -
COG functional category : J : Translation, ribosomal structure and biogenesis
COG ID : COG0689
EC number : 2.7.7.56
Position : 502068 - 502781 bp
Length : 714 bp
Strand : +
Note : RNase PH; tRNA nucleotidyltransferase; forms hexamers in Bacillus subtilis; phosphoroltic 3'-5' exoribonuclease; involved in maturation of tRNA precursors and removes terminal nucleotides near CCA acceptor arms of mature tRNAs

DNA sequence :
ATGCGCCCCTCGAAGCGCGCGGCGGACGCGATGCGCGACGTCACGCTGGAGCGGGCGGTCGCCCGCTACGCGGAAGGCTC
CTGCCTCGTCACCTTCGGCAACACCCGCGTGCTCTGCACCGCCTCCCTGGAGGAGCGGGGCCCGCCGTGGCTGCGCGGCT
CCGGCAAGGGCTGGGTGACCGCCGAATACGCCATGCTGCCCCGCGCCACCCATGAGCGCACCCGCCGCGAGGTCAATTCC
GGCAAGCCGTCGGGCCGCACGCAGGAGATCCAGCGGCTGATCGGCCGGAGCTTGCGCGCCGTCACCAACCTGCCGGCCCT
CGGCGAGCGCCAGATCACCGTCGATTGCGACGTGATCCAGGCCGATGGCGGCACCCGTACCGCCTCGATCACCGGCGCCT
GGGTGGCCCTGCACGATTGCTTCGCCTGGATGCGCGCCCGCTCGATCATCTCGGTCGATCCCCTGAAGGACCATGTCGCG
GCGGTCTCCTGCGGCATCTACAAGGGCCAGCCGGTGCTCGACCTCGACTATGCCGAGGATTCGGCCGCCGAGACCGACGC
GAACTTCGTCGTCACCGGTAAGGGCGGCATCGTCGAGGTGCAGGGTACCGCCGAGATGGAGCCCTTCTCGGAGGCGCAGT
TCATCGAATTGCTCGCGCTGGCCAAGGGCGGCATCGCCAATCTGGTCGAGCTGCAGCGGAAGGCCATCGCGTGA

Protein sequence :
MRPSKRAADAMRDVTLERAVARYAEGSCLVTFGNTRVLCTASLEERGPPWLRGSGKGWVTAEYAMLPRATHERTRREVNS
GKPSGRTQEIQRLIGRSLRAVTNLPALGERQITVDCDVIQADGGTRTASITGAWVALHDCFAWMRARSIISVDPLKDHVA
AVSCGIYKGQPVLDLDYAEDSAAETDANFVVTGKGGIVEVQGTAEMEPFSEAQFIELLALAKGGIANLVELQRKAIA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
rph YP_001800860.1 ribonuclease PH Not tested Not named Protein 1e-53 53