Gene Information

Name : Mpop_4474 (Mpop_4474)
Accession : YP_001927108.1
Strain : Methylobacterium populi BJ001
Genome accession: NC_010725
Putative virulence/resistance : Virulence
Product : ABC transporter
Function : -
COG functional category : Q : Secondary metabolites biosynthesis, transport and catabolism
COG ID : COG4181
EC number : -
Position : 4766838 - 4767521 bp
Length : 684 bp
Strand : -
Note : PFAM: ABC transporter; SMART: AAA ATPase; KEGG: mex:Mext_3993 ABC transporter

DNA sequence : 
ATGTCGAACAAGGCCGTCTCCCTGTCGCAGATCGAGCTGAGCCTCGGCCGCGGCCCCGCGCGGGTGCATGTCCTGCGCGG
CATCTCCCTCGATGTCGAGCGGGGCGAGGCGGTGGGCCTCGTCGGGCCCTCGGGCTCGGGGAAATCCACCCTGCTCACGG
TGATGGCCGGGCTGGAGCGGCCCGATACCGGCCGCGTCACCATCGCCGGGACCGATCTGAGCGGCCTCGACGAGGACGGG
CTCGCGCGCTTCCGCGGCCGCAATATCGGCATCGTGTTCCAGGCGTTCCACCTCGTGCCGACCATGACCGCGCTGGAGAA
CGTGGCGCTGCCGCTCGAACTCGCGGGCGCGCCCGACCCGCACGGGCGGGCTGCGGCGGAATTGGAGGCGGTGGGGCTCG
GGCACCGGCTGCGGCACTATCCGGCGCAGCTCTCCGGCGGCGAGCAGCAGCGAGTGGCGATCGCCCGCGCGCTCGCGCCC
GATCCGGCGATCCTGGTCGCCGACGAGCCGACCGGAAACCTCGACGAGGCGACGGGGCGGCAGATCGTGGACCTGCTGTT
CGGGCTGAAGCGGGACCGCGGCGCGACGCTCGTGCTGGTGACGCACGATCCCGGCCTCGCCCGGCTGTGCGACCGCACGG
TACGCCTGCGCGCCGGCCGGATCGAGGCACCGGCCGAAGCCTGA

Protein sequence : 
MSNKAVSLSQIELSLGRGPARVHVLRGISLDVERGEAVGLVGPSGSGKSTLLTVMAGLERPDTGRVTIAGTDLSGLDEDG
LARFRGRNIGIVFQAFHLVPTMTALENVALPLELAGAPDPHGRAAAELEAVGLGHRLRHYPAQLSGGEQQRVAIARALAP
DPAILVADEPTGNLDEATGRQIVDLLFGLKRDRGATLVLVTHDPGLARLCDRTVRLRAGRIEAPAEA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cur_1502 YP_001800896.1 cell division ATP-binding protein FtsE Not tested Not named Protein 2e-30 45
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-32 45
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 2e-32 45
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-32 45
unnamed ABA47263.1 ABC transporter Not tested S-PAI Protein 5e-23 45
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 5e-32 43

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Mpop_4474 YP_001927108.1 ABC transporter NC_008702.1.4606598. Protein 1e-37 49
Mpop_4474 YP_001927108.1 ABC transporter NC_012469.1.7686878. Protein 3e-42 45
Mpop_4474 YP_001927108.1 ABC transporter CP001581.1.gene598.p Protein 1e-42 44
Mpop_4474 YP_001927108.1 ABC transporter CP001581.1.gene798.p Protein 1e-37 43
Mpop_4474 YP_001927108.1 ABC transporter NC_012469.1.7685735. Protein 5e-39 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Mpop_4474 YP_001927108.1 ABC transporter VFG2059 Protein 6e-15 41