|
Name : Mpop_3216 (Mpop_3216) Accession : YP_001925902.1 Strain : Methylobacterium populi BJ001 Genome accession: NC_010725 Putative virulence/resistance : Virulence Product : NAD-dependent epimerase/dehydratase Function : - COG functional category : M : Cell wall/membrane/envelope biogenesis COG ID : COG0451 EC number : - Position : 3445083 - 3446096 bp Length : 1014 bp Strand : + Note : PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; dTDP-4-dehydrorhamnose reductase; Male sterility domain; KEGG: mex:Mext_3027 NAD-dependent epimerase/dehydratase DNA sequence : ATGCACGCTCTCGTCACGGGCTCGGCCGGGTTCATCGGCCATGCGCTGAGCCGCCGCCTGCTGGCGGCGGGCCACGGCGT GACGGGCTTCGATGCCCTCTCGCCCTATTACGACGTCGCGCTGAAGCGGGCGCGGCACGCGGATCTGGCTCGGCATCCCG GCTTCGAGGCGGTGGAGGCGCGGCTGGAGACGCCCGGTGCGCTCCTCGACGTGATGGCGCGCGTAAAACCCGACCTCGTC TTCCACCTCGCGGCCCAGGCCGGCGTCCGCTACAGCCTCATCGACCCCGGCGCCTATGTCGAAGCCAACCTCGTCGGCTT CGCCAACCTGCTGGAGGCCGTGCGCGCCCATCCGGTGCGGCACCTGCTGACGGCCTCGACCAGTTCGGCCTATGGCGGCA ACACGAGTGTGCCGTTCCGCGAGACCGACCGCGCGGTCTCCCCGCTCACCCTCTACGCCGCCTCGAAGCTCGCCAACGAG GCGATGGCGCATTCCTACGCCCACCTGTTCGGTGTGCCGACGACCGCCTTCCGCTTCTTCACGGTCTACGGCCCCTGGGG CCGGCCGGACATGGCGCTGTTCCTGTTCACCCGGAAGATCCTGGCCGGCGAGCCGATCGAGGTGTTCGGCGAGGGCGCGG CGGAGCGCGACTTCACCTTCATCGACGATCTCGTCGACGCGATCCTGGCCCTGTCCGAGCGCCCGCCGCCGAGGCCCTCC GCGGGCGGCCCGGTCTCGCCGGCGGACACCTTGAGCGCGGTGGCGCCCTATCGTCTCGTCAATATCGGTGGCGGTCGCCC GGTCCGGCTCGACGCCATGATCGGCGCCCTCGAAACCGCCCTGGGGCGAAAGGCCGAGCGCGTGCTCAAGCCGCTCCCGC CCGGGGACGTGATCCGCACCCATGCCAGCACCGATCTGCTGGCCGACCTCGTCGGCCGCCTGCCCGAGACGCCGCTGGAG ATCGGCATCCCCGCCTTCGTGAAGTGGTACCTCGGCTACTACGGGACACCGTAG Protein sequence : MHALVTGSAGFIGHALSRRLLAAGHGVTGFDALSPYYDVALKRARHADLARHPGFEAVEARLETPGALLDVMARVKPDLV FHLAAQAGVRYSLIDPGAYVEANLVGFANLLEAVRAHPVRHLLTASTSSAYGGNTSVPFRETDRAVSPLTLYAASKLANE AMAHSYAHLFGVPTTAFRFFTVYGPWGRPDMALFLFTRKILAGEPIEVFGEGAAERDFTFIDDLVDAILALSERPPPRPS AGGPVSPADTLSAVAPYRLVNIGGGRPVRLDAMIGALETALGRKAERVLKPLPPGDVIRTHASTDLLADLVGRLPETPLE IGIPAFVKWYLGYYGTP |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| cap1I | AAA64648.1 | type 1 capsule synthesis gene | Virulence | SCCcap1 | Protein | 6e-73 | 46 |
