Gene Information

Name : Mpop_0259 (Mpop_0259)
Accession : YP_001922979.1
Strain : Methylobacterium populi BJ001
Genome accession: NC_010725
Putative virulence/resistance : Unknown
Product : short-chain dehydrogenase/reductase SDR
Function : -
COG functional category : I : Lipid transport and metabolism
COG ID : COG1028
EC number : -
Position : 268674 - 269423 bp
Length : 750 bp
Strand : +
Note : PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: mex:Mext_2090 short-chain dehydrogenase/reductase SDR

DNA sequence : 
ATGCTTTTGAAAGACAGAGTCTGCGTGATCACGGGAGCGGCCTCAGCCCGCGGCATCGGGCGGGCTACGGCACACGCCTT
CGCCGCACAAGGCGGCCGGGTGGTCGTCCTCGACCTTGATGCCGGCCAAGCTGAGGCTGCGGCGCGCGACATCGGTCCTG
CTCATTTCGGGTTCGCTTGCGACGTCACGGACAAGGCCGCCTGTCGGGCCGCCGCCGAGGAGGTGGTCGGGCAAGCCGGC
CGGATCGACGTCCTCGTCAACAATGCCGGGATCACCCAGCCCCTGAAGCTGATGGAGATCGACGCGGCCCATTACGAGGC
CGTCACCGACGTGAACCTGCGCGGCACCCTCTACATGAGTCAGGCAGTGGTCCCGACGATGCGGGCGCAGCGCGCCGGCT
CGATCGTGTGCCTGTCATCCGTCTCGGCGCAGCGCGGCGGCGGCATCTTCGGCGGTCCGCATTACAGTGCCGCCAAGGCC
GGCGTACTCGGCCTCGCCAAGGCGATGGCGCGCGAACTCGGCTCGGACGGCATCCGCGTGAACTCGGTCACGCCCGGCCT
GATCCAGACCGACATCACCGGCGGGAAGCTGACCGAGGAACTCCGCGCCGAGATCATCAAGGGCATTCCCCTGGGCCGCC
TGGGCGTCGCGGACGACGTCGCCAATGCGTGCCTGTTCCTGGCGAGCGACCTGTCGGCCTACCTCACCGGCACGGTCATC
GACGTCAACGGCGGCATGCTGATCCACTGA

Protein sequence : 
MLLKDRVCVITGAASARGIGRATAHAFAAQGGRVVVLDLDAGQAEAAARDIGPAHFGFACDVTDKAACRAAAEEVVGQAG
RIDVLVNNAGITQPLKLMEIDAAHYEAVTDVNLRGTLYMSQAVVPTMRAQRAGSIVCLSSVSAQRGGGIFGGPHYSAAKA
GVLGLAKAMARELGSDGIRVNSVTPGLIQTDITGGKLTEELRAEIIKGIPLGRLGVADDVANACLFLASDLSAYLTGTVI
DVNGGMLIH

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAT96098.1 putative short-chain type regulator dehydrogenase Not tested T-PAI Protein 2e-70 68
unnamed AAT96175.1 putative short-chain type regulator Not tested T-PAI Protein 1e-70 68
unnamed AAT96227.1 putative short-chain type regulator Not tested T-PAI Protein 1e-70 68
unnamed AAT96115.1 putative short-chain type regulator Not tested T-PAI Protein 4e-71 68
unnamed AAT96054.1 putative short-chain type regulator Not tested T-PAI Protein 3e-70 68