Gene Information

Name : Mpop_1407 (Mpop_1407)
Accession : YP_001924109.1
Strain : Methylobacterium populi BJ001
Genome accession: NC_010725
Putative virulence/resistance : Virulence
Product : transcriptional regulator
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 1527071 - 1527748 bp
Length : 678 bp
Strand : -
Note : PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: mex:Mext_1411 response regulator receiver

DNA sequence : 
GTGCGTCTGCTCGTGGTCGAGGATGACCGGGACATCAACCGACAGGTCGTGGCGGCCTTGGAAGAGGCCGGCTACGTCGC
CGACAAGGCTTTCGACGGGGAGGAGGGCGGCTATCTCGGCGAGAACGAGCCCTACGACGCCATCATCCTCGATATGGGCC
TGCCCAAGGCCGACGGCGTCACCGTGCTCCAGAACTGGCGCCGGGCCGGGGTGAAGACCCCCGTCATCATCCTCACCGCC
CGCGACCGCTGGTCGGACAAGGTCGACGGCTTCGATGCGGGCGCCGACGACTACGTCACCAAGCCCTTCCACATGGAGGA
GCTGATGGCCCGGGTGCGCGCGATCCTTCGCCGCGCGGCCGGGCACGCGTCCAGCCAGATCTCATGCGGGCCCGTCACCC
TCGACACCCGCTCGGGCCGCGTCTTCGTCGACGGCGCCCCGATCAAGCTGACGAGCCACGAATACCGGCTGCTGTCCTAC
CTGATGCACCATACCGGCCGCGTCGTCTCCCGCGCCGAGCTGACCGAGCATCTCTACGACCAGGATTTCGACCGGGACTC
CAACACCATCGAGGTGTTCGTCGGGCGCCTCAGGAAGAAGCTCGCCGTGGACCTGATCCAGACGGTGCGGGGGCTCGGCT
ATCTGATCGATCCGAACCAGCCGCCCGGGCGGGGGTGA

Protein sequence : 
MRLLVVEDDRDINRQVVAALEEAGYVADKAFDGEEGGYLGENEPYDAIILDMGLPKADGVTVLQNWRRAGVKTPVIILTA
RDRWSDKVDGFDAGADDYVTKPFHMEELMARVRAILRRAAGHASSQISCGPVTLDTRSGRVFVDGAPIKLTSHEYRLLSY
LMHHTGRVVSRAELTEHLYDQDFDRDSNTIEVFVGRLRKKLAVDLIQTVRGLGYLIDPNQPPGRG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
armR AAN62112.1 putative response-regulator ArmR Not tested PAGI-2(C) Protein 5e-33 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Mpop_1407 YP_001924109.1 transcriptional regulator CP000647.1.gene1136. Protein 8e-41 47
Mpop_1407 YP_001924109.1 transcriptional regulator BAC0530 Protein 7e-41 47
Mpop_1407 YP_001924109.1 transcriptional regulator CP001918.1.gene2526. Protein 9e-40 46
Mpop_1407 YP_001924109.1 transcriptional regulator NC_002516.2.879194.p Protein 7e-43 46
Mpop_1407 YP_001924109.1 transcriptional regulator CP001138.1.gene1939. Protein 2e-41 45
Mpop_1407 YP_001924109.1 transcriptional regulator NC_002695.1.913289.p Protein 2e-40 44
Mpop_1407 YP_001924109.1 transcriptional regulator CP000034.1.gene2022. Protein 4e-41 44
Mpop_1407 YP_001924109.1 transcriptional regulator CP004022.1.gene1005. Protein 1e-40 43
Mpop_1407 YP_001924109.1 transcriptional regulator BAC0487 Protein 1e-37 42
Mpop_1407 YP_001924109.1 transcriptional regulator BAC0308 Protein 3e-31 42
Mpop_1407 YP_001924109.1 transcriptional regulator BAC0197 Protein 3e-34 41
Mpop_1407 YP_001924109.1 transcriptional regulator BAC0125 Protein 2e-35 41
Mpop_1407 YP_001924109.1 transcriptional regulator BAC0638 Protein 3e-28 41
Mpop_1407 YP_001924109.1 transcriptional regulator BAC0111 Protein 3e-33 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Mpop_1407 YP_001924109.1 transcriptional regulator VFG0475 Protein 2e-41 45
Mpop_1407 YP_001924109.1 transcriptional regulator VFG1389 Protein 1e-30 41