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Name : fliP (CLH_0822) Accession : YP_001920217.1 Strain : Clostridium botulinum Alaska E43 Genome accession: NC_010723 Putative virulence/resistance : Virulence Product : flagellar biosynthetic protein FliP Function : - COG functional category : N : Cell motility COG ID : COG1338 EC number : - Position : 849794 - 850573 bp Length : 780 bp Strand : + Note : identified by match to protein family HMM PF00813; match to protein family HMM TIGR01103 DNA sequence : ATGAAAAAAAATAAAAACAAAGTTATGTTTGTGTTAGTTTTAGCTTTTGCTATTATAACATTTTGTGGAATCAAAGCTTA TGCCGTTCCAGAAGGTATAGATTTACCACAAGTGAATGTAGCTATTGGAGATGGTGAAAGTAGTCCCAATGATTATGTTA ATAATATAAAAATATTAATATTTTTCACTATTCTTGCAGTACTACCATCTATAGTTATAATGTTGACATCTTTTACAAGG ATAGTAATTGTATTTTCATTTATTAAAAGTGCTATGGGTGTACAACAAGCAATACCTAATCAAATTTTAACAGGATTAGC ATTATTTCTTACTATATTTATTATGTCACCAGTATATAATGAAGTTAATACAAAGGCATTTCAGCCTTATATAGAGCAGA GTATAACACAGGAAGAAGCTATTGAAATAGGCTCAAAACCAATAAAAGATTTTATGCTTAAGCAAACTAGAGAAAAAGAC TTAGAACTATTTGTAGAAATTAATAATGTAGATAAAGAGGAATTAACTAGAGAAAATATTCCATTTACAACTTTGATTCC TGCATTTGCAATAAGTGAATTAAAAACAGCGTTTCAAATAGGATTTTTAATATATTTACCATTTATAGTAATTGATATGG TTGTAGCAAGTGTACTTATGTCAATGGGTATGATGATGTTGCCACCGGCTATGGTATCATTGCCATTTAAATTATTACTA TTTGTAATGGTGGATGGATGGTACTTACTCGTAAAATCGTTAATTATGAGCTTTTCGTGA Protein sequence : MKKNKNKVMFVLVLAFAIITFCGIKAYAVPEGIDLPQVNVAIGDGESSPNDYVNNIKILIFFTILAVLPSIVIMLTSFTR IVIVFSFIKSAMGVQQAIPNQILTGLALFLTIFIMSPVYNEVNTKAFQPYIEQSITQEEAIEIGSKPIKDFMLKQTREKD LELFVEINNVDKEELTRENIPFTTLIPAFAISELKTAFQIGFLIYLPFIVIDMVVASVLMSMGMMMLPPAMVSLPFKLLL FVMVDGWYLLVKSLIMSFS |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| escR | AFO66317.1 | putative LEE-encoded type III secretion system factor | Virulence | SESS LEE | Protein | 6e-25 | 42 |
| escR | AFO66400.1 | putative LEE-encoded type III secretion system factor | Virulence | SESS LEE | Protein | 6e-25 | 42 |
| ssaR | CAA68199.1 | secretion system apparatus, SsaR | Virulence | SPI-2 | Protein | 1e-24 | 42 |
| ssaR | YP_216427.1 | type III secretion system protein | Virulence | SPI-2 | Protein | 2e-24 | 42 |
| ssaR | NP_460384.1 | type III secretion system protein | Virulence | SPI-2 | Protein | 2e-24 | 42 |
| hrcR | BAB07862.1 | HrcR | Virulence | Hrp PAI | Protein | 7e-27 | 41 |
| hrcR | AAP34349.1 | HrcR | Virulence | Hrp PAI | Protein | 6e-28 | 41 |
| XC_3016 | YP_244084.1 | type III secretion system protein | Virulence | Hrp PAI | Protein | 4e-28 | 41 |
| hrcR | NP_636600.1 | type III secretion system protein | Virulence | Hrp PAI | Protein | 4e-28 | 41 |
| yscR | NP_456109.1 | putative type III secretion protein | Virulence | SPI-2 | Protein | 9e-24 | 41 |
| yscR | NP_805090.1 | type III secretion system protein | Virulence | SPI-2 | Protein | 9e-24 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| fliP | YP_001920217.1 | flagellar biosynthetic protein FliP | VFG2016 | Protein | 2e-45 | 52 |
| fliP | YP_001920217.1 | flagellar biosynthetic protein FliP | VFG2494 | Protein | 4e-46 | 51 |
| fliP | YP_001920217.1 | flagellar biosynthetic protein FliP | VFG2338 | Protein | 9e-44 | 49 |
| fliP | YP_001920217.1 | flagellar biosynthetic protein FliP | VFG1259 | Protein | 8e-48 | 49 |
| fliP | YP_001920217.1 | flagellar biosynthetic protein FliP | VFG0519 | Protein | 8e-25 | 42 |
| fliP | YP_001920217.1 | flagellar biosynthetic protein FliP | VFG0394 | Protein | 9e-25 | 42 |
