|
Name : CLH_0518 (CLH_0518) Accession : YP_001919919.1 Strain : Clostridium botulinum Alaska E43 Genome accession: NC_010723 Putative virulence/resistance : Unknown Product : protein tex Function : - COG functional category : K : Transcription COG ID : COG2183 EC number : - Position : 515869 - 518046 bp Length : 2178 bp Strand : + Note : identified by match to protein family HMM PF00575; match to protein family HMM PF09371 DNA sequence : ATGAAATCTATAGAGGAAAGATTAGCAGCAGAATTGAATTTAGGATTAAATCAAATTAACAATGTAGTAAGTCTTTTAGA TGATGGAAATACAGTTCCATTTATATCAAGATATAGAAAAGAAGCAACAGGGGGTCTTTCTGATGAAGTGTTAAGAAAGT TATCAGAGAGGCTTACTTATTTAAGAAATCTAGTTGAAAGAAAAGATGACATTAAAAGATTGATTAATGAGCAAGGAAAA TTAAATCCTGAAGTTGAAAATGCATTAGAAAAAGCAACAACATTAACAGAAGTTGAAGACATATATAGGCCATATAAACC TAAAAAGAAAACTAAAGCTACAATGGCTGTAGCAAGAGGGTTAAAGCCATTAGCAGAATTAATACAAAGCGGAGTTTTTA AAGGGAATTTAAATGAAGAAGCATCTAAATACATTAATGAAGAAAAAGGTGTATTAAAGGAAGAGGAAGCTATTCAAGGT GCATTAGATATAATTGCAGAAAATATATCTGATGAAGCTAAATTTAGAAAACATATAAGAGAATTAATTATAAAAGAAGG TTTCATAGAATCCAAAGGTGATTCAAAAGATACTACACCTTATGAAATGTATTATGATTATAAAGAAGAAGTTAAAAAGA TACCTCCACATAGAATATTAGCTATTAATAGAGGTGAAAAAGAAAAAGTATTAAGTGTAAAGATTACAGTTAATGAAGAT AAAATAATAAGATATTTAGAAAATAATATTTTAACTAGAAATGAAGTTTTAGATGAAAAATTAAAGCTTTGTATAAAGGA TTCTTTAAAAAGATTAATATACCCATCAATAGAAAGAGAAATAAGAAATGAATTAACTAATATTGGTGAAGAGGGTGCTA TAAATATATTTAAAGAAAATTTAAAAGCGTTATTATTACAAGCACCTATAAAAGGTAAAGTTGTAATGGGATTTGATCCA GGGTTTAGAACTGGATGTAAGATTGCAATATTAGATGAAACAGGTAAGTTCTTAGAGAATACAGCAGTATATCCTACTCT ACCTAAAAAAGATATTGTTGGAGCTAAAAAAACATTAAAAGAATTAATTTATAAACATGATGTTGATGTTATATCTCTTG GAAATGGTACAGCTTCAAGGGAATCAGAAGAAGTAATAGCGGAAATGATAAAAGAAATAAGAGATGAGAAGGGTAAAGAA GTATCTTATGTAATTGTATCAGAAGCAGGGGCATCAGTTTATTCAGCATCAGAGCTTGCAACTAAGGAATACCCTAATTT AGATGTTACTGTAAGGGGTGCTATATCAATAGGTAGAAGACTTCAAGACCCACTTGCAGAACTAGTAAAGATTGATCCAA AGGCTATAGGTGTAGGTCAATATCAACATGATGTTACTCCTAAAAAATTAGAACAATCATTAGCTGGTGTGGTTGAAGAT TCTGTTAATACTGTTGGTGTAGATTTAAATATAGCAACACCATCTTTATTAACATATATATCAGGAATAAATTCTACTAT TGCACAAAATATTGTAGCTTATAGAGAAGAATTAGGACAATTTAAATCAAGAAAAGAATTACTAAAAGTAAAAAGATTAG GTCAGAAGGCATATGAGCAATGTGCAGGATTTTTAAGAGTTTCTGAAAGCAAAGAATATCTGGATAATACTTCTGTACAT CCAGAGTCATATAATGTTGCAAAGAAGTTAATTGAAACTTTAGGATACAATAAGGATGATTTAAAAAATAATAATTTAGA TGATATAGATAAGAGAGCAGAAGTAAATAGAATAAATAAATTAAGTAAGGATTTAGATATTGGAGAACTTACATTAAAAG ATATAATAAAAGAATTAAAGAAGCCTGGTAGAGATCCTAGAGATGAAATGCCAGCGCCTATATTAAAAACTGGAATAATA GAGCTTAAAGATTTAAAGCCAGGAATGGTTTTAAATGGAACAGTAAGGAATGTATCTGATTTTGGAGCTTTTGTTGATAT TGGAGTTCATCAAGATGGTTTAGTTCATAAAAGTCAAATGGCAAATAGGTTTGTAAAACATCCATTAGATATAGTAAAAG TTGGCGATATAGTAAAGGTCAGTATATTAGAAGTAGATCAAAAAAGAAAGCGAATTTCTTTGAGTATGAAAGATGTAGAT GAAAAATTAGAGGCTTAA Protein sequence : MKSIEERLAAELNLGLNQINNVVSLLDDGNTVPFISRYRKEATGGLSDEVLRKLSERLTYLRNLVERKDDIKRLINEQGK LNPEVENALEKATTLTEVEDIYRPYKPKKKTKATMAVARGLKPLAELIQSGVFKGNLNEEASKYINEEKGVLKEEEAIQG ALDIIAENISDEAKFRKHIRELIIKEGFIESKGDSKDTTPYEMYYDYKEEVKKIPPHRILAINRGEKEKVLSVKITVNED KIIRYLENNILTRNEVLDEKLKLCIKDSLKRLIYPSIEREIRNELTNIGEEGAINIFKENLKALLLQAPIKGKVVMGFDP GFRTGCKIAILDETGKFLENTAVYPTLPKKDIVGAKKTLKELIYKHDVDVISLGNGTASRESEEVIAEMIKEIRDEKGKE VSYVIVSEAGASVYSASELATKEYPNLDVTVRGAISIGRRLQDPLAELVKIDPKAIGVGQYQHDVTPKKLEQSLAGVVED SVNTVGVDLNIATPSLLTYISGINSTIAQNIVAYREELGQFKSRKELLKVKRLGQKAYEQCAGFLRVSESKEYLDNTSVH PESYNVAKKLIETLGYNKDDLKNNNLDDIDKRAEVNRINKLSKDLDIGELTLKDIIKELKKPGRDPRDEMPAPILKTGII ELKDLKPGMVLNGTVRNVSDFGAFVDIGVHQDGLVHKSQMANRFVKHPLDIVKVGDIVKVSILEVDQKRKRISLSMKDVD EKLEA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| NMB0075 | NP_273139.1 | transcriptional accessory protein Tex | Not tested | IHT-A | Protein | 4e-147 | 47 |
