Gene Information

Name : CLH_3210 (CLH_3210)
Accession : YP_001922575.1
Strain : Clostridium botulinum Alaska E43
Genome accession: NC_010723
Putative virulence/resistance : Virulence
Product : galactosyl transferase CpsE
Function : -
COG functional category : M : Cell wall/membrane/envelope biogenesis
COG ID : COG2148
EC number : 2.7.8.-
Position : 3471726 - 3472397 bp
Length : 672 bp
Strand : -
Note : identified by match to protein family HMM PF02397

DNA sequence : 
GTGCAACAATTAAATCTCGGGACAGAAGAAGTTTTACTTAAAGAACAAATAAATGAATTTTCCAATAGAAGAGGATATTG
TTTTTTAAAGAGAGCTATAGATATAATTTGTTCCTTAGTGGGATTAATAGTATTAAGTCCAGTGCTTTTAATTACAGCTA
TCTGCATAAAAATAGAATCAAAAGGATCAGTGATATTTTCACAAACACGGATAGGTATTAATGGTGAAAAGTTTAATATG
TATAAGTTCAGATCAATGGTTGTAAATGCAGAAGAGCTTAAAAAGAAATTAAAAGAAAAAAACGAGATGAATGGTCCAAT
GTTTAAAATTAAAGACGATCCAAGAGTAACTAAAATTGGTAAGTTTATAAGAAAGACAAGCTTAGATGAACTTCCGCAAT
TAGTAAATGTGCTAAAAGGGGAAATGAGCTTAGTAGGACCAAGACCTTCACTAGAATGTGAAGTTATTCATTTTGAAGAC
TGGATGAAAAAACGATTATATGTAAAACCGGGATTAACATGCTACTGGCAAGTTTCAGGACGAAACGACATAGGATTCAA
GGAATGGATGGAGTTAGATGTTAAGTACGTGGAAGAAAGAAACACACTAACAGACATAAAATTAATATTTAAAACATTTT
TTGTGTTGTTTGGTGATGAACATGCTAGTTAG

Protein sequence : 
MQQLNLGTEEVLLKEQINEFSNRRGYCFLKRAIDIICSLVGLIVLSPVLLITAICIKIESKGSVIFSQTRIGINGEKFNM
YKFRSMVVNAEELKKKLKEKNEMNGPMFKIKDDPRVTKIGKFIRKTSLDELPQLVNVLKGEMSLVGPRPSLECEVIHFED
WMKKRLYVKPGLTCYWQVSGRNDIGFKEWMELDVKYVEERNTLTDIKLIFKTFFVLFGDEHAS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SSP0070 YP_300160.1 capsular polysaccharide synthesis protein Not tested SCC15305cap Protein 1e-26 43
cap1N AAL26667.1 type 8 capsule synthesis gene Virulence SCCcap1 Protein 3e-26 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
CLH_3210 YP_001922575.1 galactosyl transferase CpsE VFG1309 Protein 3e-28 45
CLH_3210 YP_001922575.1 galactosyl transferase CpsE VFG1369 Protein 3e-17 43